Linked data storage using DNA origami nanostructures

DNA-based storage is an alternative solution for archiving vast cold data. Its future development aims to meet the demands of hot data storage, which requires rapid random access and efficient data modification. Here, we present a DNA origami nanostructure-enabled linked data storage (DONLDS) system that implements a linked list architecture. This system uses distinct DNA origami shapes as nodes to store diverse data (English letters, numerals, Chinese characters) in binary locations, achieving a storage density of 222.22 Gbit/cm<sup>2</sup>. Pointers, defined by DNA strands at the nanostructure edges, establish data positions. Furthermore, detachable DNA strands serve as instructions, enabling dynamic linking of pointers for accurate storage and their reversible detachment for dynamic data retrieval. The DONLDS system eliminates the need for full-structure traversal, enables parallel data storage, and supports data insertion and removal. This highlights its adaptability and accuracy in managing complex datasets.

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Publication Details

Journal
Nature Communications
Published
2025-12-17
DOI
https://doi.org/10.1038/s41467-025-66274-x
Citations
2
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
1.61

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article

Linked data storage using DNA origami nanostructures

Chunhai Fan, Lianhui Wang, Jie Chao, Mo Xie et al.
2 citations
Nature Communications
Advanced biosensing and bioanalysis techniques
1.61
article

Linked data storage using DNA origami nanostructures

Chunhai Fan, Lianhui Wang, Jie Chao, Mo Xie, Chenhao Zhang
article en
2 citations

Abstract

DNA-based storage is an alternative solution for archiving vast cold data. Its future development aims to meet the demands of hot data storage, which requires rapid random access and efficient data modification. Here, we present a DNA origami nanostructure-enabled linked data storage (DONLDS) system that implements a linked list architecture. This system uses distinct DNA origami shapes as nodes to store diverse data (English letters, numerals, Chinese characters) in binary locations, achieving a storage density of 222.22 Gbit/cm<sup>2</sup>. Pointers, defined by DNA strands at the nanostructure edges, establish data positions. Furthermore, detachable DNA strands serve as instructions, enabling dynamic linking of pointers for accurate storage and their reversible detachment for dynamic data retrieval. The DONLDS system eliminates the need for full-structure traversal, enables parallel data storage, and supports data insertion and removal. This highlights its adaptability and accuracy in managing complex datasets.

Nature CommunicationsVol. 16(1)
Shanghai Jiao Tong University (CN), Nanjing University of Posts and Telecommunications (CN), Shanghai Advanced Research Institute (CN)
National Natural Science Foundation of China, Government of Jiangsu Province, Natural Science Foundation of Jiangsu Province, National Key Research and Development Program of China
Openalex Percentile: Top 14%
Advanced biosensing and bioanalysis techniques
1.61
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