Single-pixel imaging flow cytometry for biomedical research

High-throughput single-cell analysis and screening have become essential tools in life science research. Imaging flow cytometry, in particular, enables large-scale image-based profiling of heterogeneous cell populations, allowing statistical analysis of cellular morphology, subcellular features, and functional responses. However, its analytical capability is often limited by the use of conventional two-dimensional (2D) image sensors. In this review, we highlight recent advances in single-pixel imaging flow cytometry, which replaces 2D image sensors with single-pixel photodetectors. This approach offers advantages in sensitivity, flexibility, and speed in imaging system design and has been implemented in various optical configurations to achieve high-throughput single-cell imaging. We first introduce its key techniques, then outline representative biomedical applications, including cancer and COVID-19 research, and finally discuss current limitations and prospects for future developments. Single-pixel imaging flow cytometry is expected to serve as a versatile platform supporting both basic and translational studies in diverse biomedical applications.

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Publication Details

Journal
Inflammation and Regeneration
Published
2025-12-12
DOI
https://doi.org/10.1186/s41232-025-00401-5
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00

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article

Single-pixel imaging flow cytometry for biomedical research

Keisuke Goda, Hidenori Endo, Hiroshi Kanno, Kuniyasu Niizuma et al.
Inflammation and Regeneration
Single-cell and spatial transcriptomics
article

Single-pixel imaging flow cytometry for biomedical research

Keisuke Goda, Hidenori Endo, Hiroshi Kanno, Kuniyasu Niizuma, Zhiying Liu, Ryota Sato
article en

Abstract

High-throughput single-cell analysis and screening have become essential tools in life science research. Imaging flow cytometry, in particular, enables large-scale image-based profiling of heterogeneous cell populations, allowing statistical analysis of cellular morphology, subcellular features, and functional responses. However, its analytical capability is often limited by the use of conventional two-dimensional (2D) image sensors. In this review, we highlight recent advances in single-pixel imaging flow cytometry, which replaces 2D image sensors with single-pixel photodetectors. This approach offers advantages in sensitivity, flexibility, and speed in imaging system design and has been implemented in various optical configurations to achieve high-throughput single-cell imaging. We first introduce its key techniques, then outline representative biomedical applications, including cancer and COVID-19 research, and finally discuss current limitations and prospects for future developments. Single-pixel imaging flow cytometry is expected to serve as a versatile platform supporting both basic and translational studies in diverse biomedical applications.

Inflammation and RegenerationVol. 45(1)
Toho University (JP), Tokyo University of Science (JP), University of California, Los Angeles (US), Tohoku University (JP), Lucas Research (US), Tokyo Metropolitan Koganei Industrial High School (JP), Hubei University of Technology (CN), The University of Tokyo (JP)
Nakatani Foundation for Advancement of Measuring Technologies in Biomedical Engineering, Japan Society for the Promotion of Science
Openalex Percentile: Top 63%
Single-cell and spatial transcriptomics
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