Phosphorylation of HP1/Swi6 relieves competition with Suv39/Clr4 on nucleosomes and enables H3K9 trimethyl spreading

Heterochromatin formation in Schizosaccharomyces pombe requires the spreading of histone 3 (H3) Lysine 9 (K9) methylation (me) from nucleation centers by the H3K9 methylase, Suv39/Clr4, and the reader protein, HP1/Swi6. To accomplish this, Suv39/Clr4 and HP1/Swi6 have to associate with nucleosomes both nonspecifically, binding DNA, and octamer surfaces and specifically, via recognition of methylated H3K9 by their respective chromodomains. However, how both proteins avoid competition for the same nucleosomes in this process is unclear. Here, we show that phosphorylation tunes oligomerization and the nucleosome affinity of HP1/Swi6 such that it preferentially partitions onto Suv39/Clr4's trimethyl product rather than its unmethylated substrates. Preferential partitioning enables efficient conversion from di-to trimethylation on nucleosomes in vitro and H3K9me3 spreading in vivo. Together, our data suggest that phosphorylation of HP1/Swi6 creates a regime that increases oligomerization and relieves competition with the "read-write" mechanism of Suv39/Clr4, together promoting for productive heterochromatin spreading.

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Publication Details

Journal
Nucleic Acids Research
Published
2025-10-22
DOI
https://doi.org/10.1093/nar/gkaf1244
Citations
2
Primary Topic
Genomics and Chromatin Dynamics
Type
article
Field-Weighted Citation Impact
1.61

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article

Phosphorylation of HP1/Swi6 relieves competition with Suv39/Clr4 on nucleosomes and enables H3K9 trimethyl spreading

Julian Braxton, Eric Simental, Ahmed A. A. Amine, Bassem Al‐Sady et al.
2 citations
Nucleic Acids Research
Genomics and Chromatin Dynamics
1.61
article

Phosphorylation of HP1/Swi6 relieves competition with Suv39/Clr4 on nucleosomes and enables H3K9 trimethyl spreading

Julian Braxton, Eric Simental, Ahmed A. A. Amine, Bassem Al‐Sady, Catherine Tan, Joël Lemière, Eric W. Martin, Dana R Kennedy, Robert A. Maxwell
article en
2 citations

Abstract

Heterochromatin formation in Schizosaccharomyces pombe requires the spreading of histone 3 (H3) Lysine 9 (K9) methylation (me) from nucleation centers by the H3K9 methylase, Suv39/Clr4, and the reader protein, HP1/Swi6. To accomplish this, Suv39/Clr4 and HP1/Swi6 have to associate with nucleosomes both nonspecifically, binding DNA, and octamer surfaces and specifically, via recognition of methylated H3K9 by their respective chromodomains. However, how both proteins avoid competition for the same nucleosomes in this process is unclear. Here, we show that phosphorylation tunes oligomerization and the nucleosome affinity of HP1/Swi6 such that it preferentially partitions onto Suv39/Clr4's trimethyl product rather than its unmethylated substrates. Preferential partitioning enables efficient conversion from di-to trimethylation on nucleosomes in vitro and H3K9me3 spreading in vivo. Together, our data suggest that phosphorylation of HP1/Swi6 creates a regime that increases oligomerization and relieves competition with the "read-write" mechanism of Suv39/Clr4, together promoting for productive heterochromatin spreading.

Nucleic Acids ResearchVol. 53(22)
Cardiovascular Institute Hospital (JP), Institute for Neurodegenerative Disorders (US), Cell and Tissue Systems (United States) (US), Hoopes Vision (US), Laboratoire d'Informatique de Paris-Nord (FR), Institute of Biomedical Science (GB), Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (FR), Tetra Tech (United States) (US)
University of California, San Francisco
Openalex Percentile: Top 14%
Genomics and Chromatin Dynamics
1.61
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