Proteome Analysis of the Specific Proteins From Japanese Birch Callus Infected With a Canker‐Rot Fungus <i>Inonotus Obliquus</i> Strain <scp>IO</scp> ‐ <scp>U1</scp> ( <scp>NBRC</scp> 113406)

ABSTRACT The specific proteins from Japanese birch ( Betula platyphylla var. japonica plantlet No. 8) callus infected with a canker‐rot fungus Inonotus obliquus strain IO‐U1 (NBRC 113406) at the early infection stage were identified using proteome analysis. The intact, wounded, and infected calli were prepared, and the protein samples obtained at 2 days post‐treatments were subjected to two‐dimensional electrophoresis (2‐DE) for detecting infection‐specific proteins. The infection‐specific proteins were then analysed using LC/MS/MS, and the obtained data were subjected to the NCBIprot database for identifying the proteins based on homologous sequences search. A total of 134 protein spots on the 2‐DE gel were detected as infection‐specific proteins. Of these spots, 10 highly expressed proteins were identified as protochlorophyllide reductase chloroplastic (spot ID 1564), enolase (spot ID 368), mitochondrial‐processing peptidase subunit alpha‐like (spot ID 441), mitochondrial‐processing peptidase subunit alpha isoform B (spot ID 1578), T‐complex protein 1 subunit eta (spot ID 356), glutathione S ‐transferase‐like protein (spot ID 1121), glutathione S ‐transferase‐like protein, partial (spot ID 1527), protein WALLS ARE THIN 1‐like (spot ID 1444), and 1 Sc‐3 (spot IDs 1290 and 1322). The obtained results suggest that Japanese birch callus is capable of inducing several proteins related to photosynthesis, energy production, protein import machinery in mitochondria, protein folding, detoxification, secondary cell wall formation, and PR‐10 protein at the early infection stage as responses to defend itself against I. obliquus strain IO‐U1 infection.

Authors

Institutions

Publication Details

Journal
Forest Pathology
Published
2025-12-01
DOI
https://doi.org/10.1111/efp.70051
Primary Topic
Fungal and yeast genetics research
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Proteome Analysis of the Specific Proteins From Japanese Birch Callus Infected With a Canker‐Rot Fungus Inonotus Obliquus Strain IO ‐ U1 ( NBRC 113406)

Shinso Yokota, Retno Agnestisia, Rei Chino, Futoshi Ishiguri et al.
Forest Pathology
Fungal and yeast genetics research
article

Proteome Analysis of the Specific Proteins From Japanese Birch Callus Infected With a Canker‐Rot Fungus Inonotus Obliquus Strain IO ‐ U1 ( NBRC 113406)

Shinso Yokota, Retno Agnestisia, Rei Chino, Futoshi Ishiguri, Ikumi Nezu, Takayuki Tohge
article en

Abstract

ABSTRACT The specific proteins from Japanese birch ( Betula platyphylla var. japonica plantlet No. 8) callus infected with a canker‐rot fungus Inonotus obliquus strain IO‐U1 (NBRC 113406) at the early infection stage were identified using proteome analysis. The intact, wounded, and infected calli were prepared, and the protein samples obtained at 2 days post‐treatments were subjected to two‐dimensional electrophoresis (2‐DE) for detecting infection‐specific proteins. The infection‐specific proteins were then analysed using LC/MS/MS, and the obtained data were subjected to the NCBIprot database for identifying the proteins based on homologous sequences search. A total of 134 protein spots on the 2‐DE gel were detected as infection‐specific proteins. Of these spots, 10 highly expressed proteins were identified as protochlorophyllide reductase chloroplastic (spot ID 1564), enolase (spot ID 368), mitochondrial‐processing peptidase subunit alpha‐like (spot ID 441), mitochondrial‐processing peptidase subunit alpha isoform B (spot ID 1578), T‐complex protein 1 subunit eta (spot ID 356), glutathione S ‐transferase‐like protein (spot ID 1121), glutathione S ‐transferase‐like protein, partial (spot ID 1527), protein WALLS ARE THIN 1‐like (spot ID 1444), and 1 Sc‐3 (spot IDs 1290 and 1322). The obtained results suggest that Japanese birch callus is capable of inducing several proteins related to photosynthesis, energy production, protein import machinery in mitochondria, protein folding, detoxification, secondary cell wall formation, and PR‐10 protein at the early infection stage as responses to defend itself against I. obliquus strain IO‐U1 infection.

Forest PathologyVol. 55(6)
University of Palangka Raya (ID), Utsunomiya University (JP), Institute of Forest Genetics and Tree Breeding (IN), Nara Institute of Science and Technology (JP)
Openalex Percentile: Top 64%
Fungal and yeast genetics research
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.