Parameter degeneracy in the vertex model for tissues

The vertex model with homogeneous cell properties is known to exhibit a parameter degeneracy in which the system's dynamics is independent of the target area. Here, we show, for the heterogeneous vertex model where cells differ in size and stiffness, that degeneracy is also present with the average product of target areas and stiffness becoming dynamically irrelevant. Fixing this quantity is equivalent to fixing the global internal tissue pressure. Unless properly treated, this degeneracy undermines the physical relevance of key observables' numerical values, such as cell target shape index, cell pressure, and cell stress tensor. We present methods to resolve the degeneracy and to correctly set the gauge pressure via symmetry transformations applied to the cells' target areas. We further demonstrate that the degeneracy is removed under certain boundary conditions and partially lifted when spherical tissues are modeled using a locally planar approximation, leading to numerical consequences when fitting model parameters to experimental data. The approach extends beyond vertex models and provides a framework for testing whether the parameter spaces of other physical models are free from degeneracy.

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Publication Details

Journal
Physical review. E
Published
2025-11-14
DOI
https://doi.org/10.1103/s4yf-m7xp
Primary Topic
Mathematical Biology Tumor Growth
Type
article
Field-Weighted Citation Impact
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article

Parameter degeneracy in the vertex model for tissues

Rodrigo Soto, Leonardo G. Brunnet, Paulo C. Godolphim
Physical review. E
Mathematical Biology Tumor Growth
article

Parameter degeneracy in the vertex model for tissues

Rodrigo Soto, Leonardo G. Brunnet, Paulo C. Godolphim
article en

Abstract

The vertex model with homogeneous cell properties is known to exhibit a parameter degeneracy in which the system's dynamics is independent of the target area. Here, we show, for the heterogeneous vertex model where cells differ in size and stiffness, that degeneracy is also present with the average product of target areas and stiffness becoming dynamically irrelevant. Fixing this quantity is equivalent to fixing the global internal tissue pressure. Unless properly treated, this degeneracy undermines the physical relevance of key observables' numerical values, such as cell target shape index, cell pressure, and cell stress tensor. We present methods to resolve the degeneracy and to correctly set the gauge pressure via symmetry transformations applied to the cells' target areas. We further demonstrate that the degeneracy is removed under certain boundary conditions and partially lifted when spherical tissues are modeled using a locally planar approximation, leading to numerical consequences when fitting model parameters to experimental data. The approach extends beyond vertex models and provides a framework for testing whether the parameter spaces of other physical models are free from degeneracy.

Physical review. EVol. 112(6)
Universidade Federal do Rio Grande do Sul (BR), University of Chile (CL)
Openalex Percentile: Top 57%
Mathematical Biology Tumor Growth
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