Role of chain length in the penetration and clustering dynamics of 1-alkanols in lipid bilayer membranes

1-alkanols are well known to have anesthetic and penetration properties, though the mode of operation remains enigmatic. We perform extensive atomistic molecular dynamics simulation to study the penetration of 1-alkanols of different chain lengths in the dioleoyl-phosphatidylcholine (DOPC) bilayer model membrane. Our simulations show that the depth of penetration of 1-alkanol increases with chain length, n, and the deuterium order of the DOPC tail decreases with the chain length of the acyl-chain of the 1-alkanol. We find a cutoff value for the length of the acyl-chain of 1-alkanol, n=12, where 1-alkanol with a chain length greater than the cutoff value takes longer to penetrate the membrane. Our simulation study also demonstrates that the membrane exhibits clusters of 1-alkanols with acyl chains longer than the cutoff value, whereas 1-alkanols with acyl-chain shorter than the cutoff value are distributed homogeneously in the membrane and penetrate the membrane in a shorter time than longer-acyl-chain 1-alkanols. These findings add to our understanding of the anomalies in anesthetic molecule partitioning in the cell membrane and may have implications for general anesthesia.

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Publication Details

Journal
Physical review. E
Published
2025-11-19
DOI
https://doi.org/10.1103/n1yv-lb3m
Primary Topic
Lipid Membrane Structure and Behavior
Type
article
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article

Role of chain length in the penetration and clustering dynamics of 1-alkanols in lipid bilayer membranes

Anirban Polley
Physical review. E
Lipid Membrane Structure and Behavior
article

Role of chain length in the penetration and clustering dynamics of 1-alkanols in lipid bilayer membranes

Anirban Polley
article en

Abstract

1-alkanols are well known to have anesthetic and penetration properties, though the mode of operation remains enigmatic. We perform extensive atomistic molecular dynamics simulation to study the penetration of 1-alkanols of different chain lengths in the dioleoyl-phosphatidylcholine (DOPC) bilayer model membrane. Our simulations show that the depth of penetration of 1-alkanol increases with chain length, n, and the deuterium order of the DOPC tail decreases with the chain length of the acyl-chain of the 1-alkanol. We find a cutoff value for the length of the acyl-chain of 1-alkanol, n=12, where 1-alkanol with a chain length greater than the cutoff value takes longer to penetrate the membrane. Our simulation study also demonstrates that the membrane exhibits clusters of 1-alkanols with acyl chains longer than the cutoff value, whereas 1-alkanols with acyl-chain shorter than the cutoff value are distributed homogeneously in the membrane and penetrate the membrane in a shorter time than longer-acyl-chain 1-alkanols. These findings add to our understanding of the anomalies in anesthetic molecule partitioning in the cell membrane and may have implications for general anesthesia.

Physical review. EVol. 112(6)
American Academy of Arts and Sciences (US), SASTRA University (IN)
Openalex Percentile: Top 64%
Lipid Membrane Structure and Behavior
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