Single-molecule techniques for probing the conformation, dynamics, and interactions of intrinsically disordered proteins

Intrinsically disordered proteins (IDPs) rely on inherent conformational dynamics to support vital cellular functions such as signaling and regulation. The heterogeneity of the conformational ensembles of IDPs poses a major challenge for classical biophysical techniques such as nuclear magnetic resonance, small-angle x-ray scattering, and circular dichroism, which measure ensemble-averaged properties and are unable to resolve the full range of substates sampled by IDPs or their interconversions. To address these limitations of ensemble-based methods, single-molecule techniques are essential to resolve the conformational heterogeneity and dynamics by continuously monitoring various properties of individual IDPs. In this review, we focus on the most commonly employed single-molecule techniques, briefly describe their methodologies, and highlight recent developments and applications of each technique toward the study of IDP structure, dynamics and interactions.

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Journal
Biophysics Reviews
Published
2025-12-01
DOI
https://doi.org/10.1063/5.0287565
Primary Topic
Protein Structure and Dynamics
Type
article
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article

Single-molecule techniques for probing the conformation, dynamics, and interactions of intrinsically disordered proteins

Jianhan Chen, Min Chen, David DeCoeur
Biophysics Reviews
Protein Structure and Dynamics
article

Single-molecule techniques for probing the conformation, dynamics, and interactions of intrinsically disordered proteins

Jianhan Chen, Min Chen, David DeCoeur
article en

Abstract

Intrinsically disordered proteins (IDPs) rely on inherent conformational dynamics to support vital cellular functions such as signaling and regulation. The heterogeneity of the conformational ensembles of IDPs poses a major challenge for classical biophysical techniques such as nuclear magnetic resonance, small-angle x-ray scattering, and circular dichroism, which measure ensemble-averaged properties and are unable to resolve the full range of substates sampled by IDPs or their interconversions. To address these limitations of ensemble-based methods, single-molecule techniques are essential to resolve the conformational heterogeneity and dynamics by continuously monitoring various properties of individual IDPs. In this review, we focus on the most commonly employed single-molecule techniques, briefly describe their methodologies, and highlight recent developments and applications of each technique toward the study of IDP structure, dynamics and interactions.

Biophysics ReviewsVol. 6(4)
University of Massachusetts Amherst (US)
Openalex Percentile: Top 64%
Protein Structure and Dynamics
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Single-molecule techniques for probing the conformation, dynamics, and interactions of intrinsically disordered proteins — Jianhan Chen, Min Chen, et al. · Biophysics Reviews (2025) | TGRS Research Map | TGRS