A–H···π Hydrogen Bonds-Where Are Proton Acceptor Sites Located?

Different types of A-H···π hydrogen bonds are analyzed. Two extreme categories of this interaction may be specified: the first category where the A-H bond is directed to a center of the π-electron system and the second category where this bond is directed far from such a center to a carbon atom, for example, if a π-electron donor is a system of carbon centers. However, the categorization is more complicated, since there are numerous intermediate cases. The Cambridge Structural Database searches were performed here to find the first category of interactions; these are π-electron systems with the triple C≡C bond, or with the 6-member benzene ring, or with the 5-member cyclopentadienyl anion ring. The MP2/6-311++G(d,p) results of calculations on simple complexes, where acetylene, ethylene, benzene, or cyclopentadienyl anions act as a proton acceptor, are also described. These results are supported by the Natural Bond Orbital method and the Quantum Theory of Atoms in Molecule approach calculations.

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Publication Details

Journal
The Journal of Physical Chemistry A
Published
2025-12-09
DOI
https://doi.org/10.1021/acs.jpca.5c07398
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
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article

A–H···π Hydrogen Bonds-Where Are Proton Acceptor Sites Located?

Sławomir J. Grabowski
The Journal of Physical Chemistry A
Crystallography and molecular interactions
article

A–H···π Hydrogen Bonds-Where Are Proton Acceptor Sites Located?

Sławomir J. Grabowski
article en

Abstract

Different types of A-H···π hydrogen bonds are analyzed. Two extreme categories of this interaction may be specified: the first category where the A-H bond is directed to a center of the π-electron system and the second category where this bond is directed far from such a center to a carbon atom, for example, if a π-electron donor is a system of carbon centers. However, the categorization is more complicated, since there are numerous intermediate cases. The Cambridge Structural Database searches were performed here to find the first category of interactions; these are π-electron systems with the triple C≡C bond, or with the 6-member benzene ring, or with the 5-member cyclopentadienyl anion ring. The MP2/6-311++G(d,p) results of calculations on simple complexes, where acetylene, ethylene, benzene, or cyclopentadienyl anions act as a proton acceptor, are also described. These results are supported by the Natural Bond Orbital method and the Quantum Theory of Atoms in Molecule approach calculations.

The Journal of Physical Chemistry AVol. 129(50)
Ikerbasque (ES), University of the Basque Country (ES), Donostia International Physics Center (ES)
Openalex Percentile: Top 65%
Crystallography and molecular interactions
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