A data-driven and quantum chemistry-anchored framework for modeling and classifying carbon–lithium bonding in organolithium aggregates

We present a quantum chemistry-based, data-driven framework for the automated classification of carbon-lithium bonding motifs in archetypal organolithium aggregates. Starting from ab initio potential energy surfaces-guided sampling, we constructed a chemically complete dataset of 81 optimized gas-phase aggregates of methyllithium, t-butyllithium, and phenyllithium (600 C-Li bonds in total) spanning all relevant nuclearities and bonding modes. Twenty geometric, electronic, and topological descriptors obtained from quantum theory of atoms in molecules and Electron Localization Function (ELF) analyses were evaluated via correlation clustering, yielding a minimal, non-redundant, chemically meaningful set dominated by the ELF basin electron population and key bond-path metrics. This reduced descriptor set was used to train two complementary supervised models-a multi-task fully connected neural network and a bootstrap-aggregated decision tree-achieving accuracies of 84% (nucleophile type), 89% (aggregation state), and 84% (bond type) on validation data. Both methods consistently identified ELF-derived descriptors as the most discriminative, enabling physically grounded separation of bonding regimes (2c-2e, multi-center, non-classical, π-Li) and providing an interpretable, transferable platform for high-throughput bonding analysis in organometallic chemistry.

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Publication Details

Journal
The Journal of Chemical Physics
Published
2025-12-09
DOI
https://doi.org/10.1063/5.0296473
Primary Topic
Machine Learning in Materials Science
Type
article
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article

A data-driven and quantum chemistry-anchored framework for modeling and classifying carbon–lithium bonding in organolithium aggregates

Elena Yu. Tupikina, Valeriy A. Verkhov, Alexander S. Antonov, Stepan A. Meshalkin
The Journal of Chemical Physics
Machine Learning in Materials Science
article

A data-driven and quantum chemistry-anchored framework for modeling and classifying carbon–lithium bonding in organolithium aggregates

Elena Yu. Tupikina, Valeriy A. Verkhov, Alexander S. Antonov, Stepan A. Meshalkin
article en

Abstract

We present a quantum chemistry-based, data-driven framework for the automated classification of carbon-lithium bonding motifs in archetypal organolithium aggregates. Starting from ab initio potential energy surfaces-guided sampling, we constructed a chemically complete dataset of 81 optimized gas-phase aggregates of methyllithium, t-butyllithium, and phenyllithium (600 C-Li bonds in total) spanning all relevant nuclearities and bonding modes. Twenty geometric, electronic, and topological descriptors obtained from quantum theory of atoms in molecules and Electron Localization Function (ELF) analyses were evaluated via correlation clustering, yielding a minimal, non-redundant, chemically meaningful set dominated by the ELF basin electron population and key bond-path metrics. This reduced descriptor set was used to train two complementary supervised models-a multi-task fully connected neural network and a bootstrap-aggregated decision tree-achieving accuracies of 84% (nucleophile type), 89% (aggregation state), and 84% (bond type) on validation data. Both methods consistently identified ELF-derived descriptors as the most discriminative, enabling physically grounded separation of bonding regimes (2c-2e, multi-center, non-classical, π-Li) and providing an interpretable, transferable platform for high-throughput bonding analysis in organometallic chemistry.

The Journal of Chemical PhysicsVol. 163(22)
St Petersburg University (RU), University of Regensburg (DE)
Openalex Percentile: Top 68%
Machine Learning in Materials Science
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A data-driven and quantum chemistry-anchored framework for modeling and classifying carbon–lithium bonding in organolithium aggregates — Elena Yu. Tupikina, Valeriy A. Verkhov, et al. · The Journal of Chemical Physics (2025) | TGRS Research Map | TGRS