Complete genome sequence of Heyndrickxia oleronia EISK28 isolated from human facial skin
H. oleronia EISK28 was isolated from human facial skin and sequenced using Oxford Nanopore long-read technology. De novo assembly resulted in a single complete circular chromosome of 5,118,808 bp with 164× coverage depth. Structural annotation identified 5,143 genes comprising 4,958 CDSs, 36 rRNAs, 144 tRNAs, 5 non-coding RNAs, and 65 pseudo genes. Functional annotation assigned the predicted CDSs to 22 of 25 COG categories and identified 93 carbohydrate-active enzymes. Secondary metabolite analysis revealed three biosynthetic gene clusters, and genome-based antibiotic resistance profiling predicted 11 resistance genes, while phenotypic testing confirmed resistance to ampicillin and penicillin. Mobile genetic element screening detected 34 insertion sequences, 2 prophages, and 16 genomic islands but no association with antibiotic resistance genes.
Authors
- Jae‐Ho Shin (ORCID: https://orcid.org/0000-0001-6450-9787)
- Jin Mo Kim
- Da-Ryung Jung
- Ji Hoon Ha (ORCID: https://orcid.org/0000-0001-8250-0313)
- YeonGyun Jung (ORCID: https://orcid.org/0000-0002-4117-7369)
- Yoon Soo Cho (ORCID: https://orcid.org/0000-0002-9959-3285)
- Ikwhan Kim
- Jin Young Kim (ORCID: https://orcid.org/0000-0002-0656-1269)
- Eun Kyung Lee (ORCID: https://orcid.org/0000-0003-3529-1912)
Institutions
- Hallym University (KR)
- Kyungpook National University (KR)
- Kolmar Korea (South Korea) (KR)
- Hallym University Hangang Sacred Heart Hospital (KR)
Publication Details
- Journal
- BMC Genomic Data
- Published
- 2025-12-08
- DOI
- https://doi.org/10.1186/s12863-025-01388-1
- Primary Topic
- Microbial Natural Products and Biosynthesis
- Type
- article
- Field-Weighted Citation Impact
- 0.00