Structure, Function, and Inhibition of Adenylosuccinate Lyase (ADSL) from <i>Mycobacterium tuberculosis</i>
<i>Adenylosuccinate lyase</i> (ADSL), encoded by the <i>purB</i> gene, is an essential enzyme in the purine biosynthesis pathway of <i>Mycobacterium tuberculosis</i> (<i>Mtb</i>), making it a promising target for antimicrobial drug development. Here, we report the expression, purification, kinetic characterization, high-throughput screening (HTS), and structural analysis of <i>Mtb</i> ADSL. We developed a highly sensitive and scalable bioluminescent assay using a PPDK-luciferase coupling system to quantify ADSL enzymatic activity <i>via</i> AMP detection. This assay enabled reliable kinetic analysis and successful pilot HTS of a small-molecule library, identifying bithionol and tetraiodothyroacetic acid (Tetrac) as inhibitors of <i>Mtb</i> ADSL. Inhibitory activity was confirmed using an orthogonal fluorescence polarization (FP) assay and further validated using the AMP-Glo luminescence assay. Specificity was evaluated using human ADSL (<i>hu</i>ADSL) to confirm that the compounds selectively inhibited <i>Mtb</i> ADSL while sparing the human enzyme. Thermal shift and gel-based protein stability assays demonstrated direct binding of bithionol and Tetrac to <i>Mtb</i> ADSL. Furthermore, bithionol and Tetrac displayed antibacterial activity against <i>M. tuberculosis</i> strains H37Ra and H37Rv, with moderate to low cytotoxicity toward human cells. Supplementation with exogenous AMP restored the growth of <i>M. tuberculosis</i> H37Ra inhibited by bithionol and Tetrac, confirming that both compounds act through on-target engagement of <i>Mtb</i> ADSL. The phagocytosis assay demonstrated that the compounds retained intracellular efficacy against <i>M. tuberculosis</i>. Finally, we determined the crystal structures of <i>Mtb</i> ADSL in two apo forms at high resolution (1.78 Å and 2.1 Å), revealing conserved tetrameric architecture with distinct active-site features that differentiate <i>Mtb</i> from human ADSL. Modeling suggested that both compounds bind to an allosteric site adjacent to the active site. These findings provide a framework for structure-guided development of selective ADSL inhibitors as potential antitubercular agents.
Authors
- Mingyu Ma
- Devi Jaganathan (ORCID: https://orcid.org/0009-0000-3374-2391)
- Ruisheng Xiong (ORCID: https://orcid.org/0000-0002-8165-5863)
- Anil Kumar Ojha (ORCID: https://orcid.org/0000-0001-5940-2643)
- K.P. Battaile (ORCID: https://orcid.org/0000-0003-0833-3259)
- Jamie Corro
- Vigyasa Singh (ORCID: https://orcid.org/0000-0002-1245-0637)
- Subodh Kumar Samrat (ORCID: https://orcid.org/0000-0002-8600-3901)
- Ran Zhang
- Zhong Li (ORCID: https://orcid.org/0000-0002-1039-7000)
- Ke Chen (ORCID: https://orcid.org/0000-0002-0045-1560)
- Qingyu Zhang (ORCID: https://orcid.org/0000-0002-0497-3630)
- Hongmin Li (ORCID: https://orcid.org/0000-0002-8684-5308)
Institutions
- Oklahoma State Department of Health (US)
- New York State Department of Health (US)
- Wadsworth Center (US)
- University of Arizona (US)
- University at Albany, State University of New York (US)
- New York Structural Biology Center (US)
- Department of Physics, Mathematics and Informatics (BY)
- Cellular Research (United States) (US)
- Institut de Biologie Moléculaire et Cellulaire (FR)
- BIO5 Institute
Publication Details
- Journal
- ACS Infectious Diseases
- Published
- 2025-12-08
- DOI
- https://doi.org/10.1021/acsinfecdis.5c00442
- Primary Topic
- Biochemical and Molecular Research
- Type
- article
- Field-Weighted Citation Impact
- 0.00