SOUP: Sleep Data Copilot for Accurate Hypnogram Labeling

Sleep analysis is crucial for diagnosing disorders and understanding physiological patterns. However, accurately labeling hypnograms is challenging due to significant interrater variability and resource constraints that limit the use of multiple experts. This study introduces a novel verification tool that assesses biomedical signals, including heart rate and activity, alongside labeled hypnograms against state-of-the-art conditions. The tool was developed to evaluate the quality and reliability of hypnogram annotations, providing feedback on the credibility of labels generated by automated methods and single expert annotations. It cross-references labeled data against physiological signals and identifies discrepancies or anomalies that may indicate errors in the labeling process. For validation, the tool was applied to the MESA dataset, a well-known collection of sleep data. Application of the tool demonstrated its ability to provide objective feedback on hypnogram labels and to identify anomalies in patient data, potentially assisting clinicians in refining their assessments. By offering a user-friendly interface and flexible design, this verification tool enhances the accuracy of sleep stage annotations and serves as a valuable resource for both clinical and research applications.

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Publication Details

Journal
Applied Sciences
Published
2025-12-08
DOI
https://doi.org/10.3390/app152412912
Primary Topic
EEG and Brain-Computer Interfaces
Type
article
Field-Weighted Citation Impact
0.00

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article

SOUP: Sleep Data Copilot for Accurate Hypnogram Labeling

Marta Verona-Almeida, Rybel Wix, Javier Mendez, José L. Ayala et al.
Applied Sciences
EEG and Brain-Computer Interfaces
article

SOUP: Sleep Data Copilot for Accurate Hypnogram Labeling

Marta Verona-Almeida, Rybel Wix, Javier Mendez, José L. Ayala, Josué Pagán
article en

Abstract

Sleep analysis is crucial for diagnosing disorders and understanding physiological patterns. However, accurately labeling hypnograms is challenging due to significant interrater variability and resource constraints that limit the use of multiple experts. This study introduces a novel verification tool that assesses biomedical signals, including heart rate and activity, alongside labeled hypnograms against state-of-the-art conditions. The tool was developed to evaluate the quality and reliability of hypnogram annotations, providing feedback on the credibility of labels generated by automated methods and single expert annotations. It cross-references labeled data against physiological signals and identifies discrepancies or anomalies that may indicate errors in the labeling process. For validation, the tool was applied to the MESA dataset, a well-known collection of sleep data. Application of the tool demonstrated its ability to provide objective feedback on hypnogram labels and to identify anomalies in patient data, potentially assisting clinicians in refining their assessments. By offering a user-friendly interface and flexible design, this verification tool enhances the accuracy of sleep stage annotations and serves as a valuable resource for both clinical and research applications.

Applied SciencesVol. 15(24)
Universidad Complutense de Madrid (ES), Hospital Universitario de La Princesa (ES), Universidad Politécnica de Madrid (ES), Leipzig University (DE)
National Institutes of Health, National Heart, Lung, and Blood Institute, National Center for Advancing Translational Sciences
Openalex Percentile: Top 61%
EEG and Brain-Computer Interfaces
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