Columba: fast approximate pattern matching with optimized search schemes
The source code of Columba is available at https://github.com/biointec/columba under AGPL license. Scripts to reproduce the benchmarks and analyses are available at https://doi.org/10.5281/zenodo.15849246.
Authors
- Luca Renders (ORCID: https://orcid.org/0000-0002-2244-1427)
- Travis Gagie (ORCID: https://orcid.org/0000-0003-3689-327X)
- Jan Fostier (ORCID: https://orcid.org/0000-0002-9994-8269)
- Lore Depuydt (ORCID: https://orcid.org/0000-0001-8517-0479)
Institutions
- Dalhousie University (CA)
- Ghent University (BE)
- iMinds (BE)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-12-01
- DOI
- https://doi.org/10.1093/bioinformatics/btaf652
- Primary Topic
- Advanced Image and Video Retrieval Techniques
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Fonds Wetenschappelijk Onderzoek
- Vlaamse regering