Setting the stage for cardiomyopathy gene editing trials: a systematic review of isogenic pair use in human induced pluripotent stem cell-derived cardiomyocyte research

<i>In vitro</i> gene editing using isogenic pairs of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) has demonstrated the feasibility of introducing or correcting specific pathogenic variants. These successes represent a key first step towards therapeutic genome editing for cardiomyopathies, showing that precise, variant-specific interventions are achievable. To translate <i>in vitro</i> findings to the clinic, it is essential to develop robust disease models that yield meaningful, translatable data. The next challenge is systematically identifying disease-causing variants amenable to gene editing with strong pre-clinical support. Therefore, we conducted a systematic search of published studies on isogenic hiPSC-CM pairs in cardiomyopathy research with specific criteria, including (likely) pathogenic variants causing cardiomyopathy, correction and/or introduction of variants, differentiation into CMs, and functional follow-up. We systematically assessed 785 papers and highlighted 101 studies meeting our inclusion criteria reporting 69 patients carrying 56 unique variants across 31 genes, most commonly <i>MYH7</i>, <i>MYBPC3</i>, and <i>DMD</i>. This expanded to 91 variants across 38 genes upon inclusion of the introduced variants in a donor line. However, reported clinical data were often incomplete, underscoring the need for standardized phenotypic documentation. We reveal a lack of patient details, which creates an incomplete picture of underlying disease variables that hinder the design of targeted personalized treatments. Omitted key clinical data can lead to misinterpretations or overlooked variables that impact treatment outcomes. This systematic review integrates current evidence from successful <i>in vitro</i> studies using isogenic hiPSC-CM models and proposes a reporting framework for variant prioritization and the rigorous application of isogenic controls in cardiomyopathy research.

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Journal
European Heart Journal Open
Published
2025-12-02
DOI
https://doi.org/10.1093/ehjopen/oeaf161
Primary Topic
CRISPR and Genetic Engineering
Type
article
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article

Setting the stage for cardiomyopathy gene editing trials: a systematic review of isogenic pair use in human induced pluripotent stem cell-derived cardiomyocyte research

Joost P. G. Sluijter, Frank G. van Steenbeek, Jolanda van der Velden, Chris Denning et al.
European Heart Journal Open
CRISPR and Genetic Engineering
article

Setting the stage for cardiomyopathy gene editing trials: a systematic review of isogenic pair use in human induced pluripotent stem cell-derived cardiomyocyte research

Joost P. G. Sluijter, Frank G. van Steenbeek, Jolanda van der Velden, Chris Denning, Pim van der Harst, Judith Montag, Linda W. van Laake, Michèle Janssens, I.B. Ivo Bakker, Eric Villard, Rogier J. A. Veltrop, Leon J. Schurgers, Francesca Stillitano, J. Peter van Tintelen, Anneline S.J.M. te Riele, Magdaléna Harakaľová, C.L. van der Wilt
article en

Abstract

<i>In vitro</i> gene editing using isogenic pairs of human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) has demonstrated the feasibility of introducing or correcting specific pathogenic variants. These successes represent a key first step towards therapeutic genome editing for cardiomyopathies, showing that precise, variant-specific interventions are achievable. To translate <i>in vitro</i> findings to the clinic, it is essential to develop robust disease models that yield meaningful, translatable data. The next challenge is systematically identifying disease-causing variants amenable to gene editing with strong pre-clinical support. Therefore, we conducted a systematic search of published studies on isogenic hiPSC-CM pairs in cardiomyopathy research with specific criteria, including (likely) pathogenic variants causing cardiomyopathy, correction and/or introduction of variants, differentiation into CMs, and functional follow-up. We systematically assessed 785 papers and highlighted 101 studies meeting our inclusion criteria reporting 69 patients carrying 56 unique variants across 31 genes, most commonly <i>MYH7</i>, <i>MYBPC3</i>, and <i>DMD</i>. This expanded to 91 variants across 38 genes upon inclusion of the introduced variants in a donor line. However, reported clinical data were often incomplete, underscoring the need for standardized phenotypic documentation. We reveal a lack of patient details, which creates an incomplete picture of underlying disease variables that hinder the design of targeted personalized treatments. Omitted key clinical data can lead to misinterpretations or overlooked variables that impact treatment outcomes. This systematic review integrates current evidence from successful <i>in vitro</i> studies using isogenic hiPSC-CM models and proposes a reporting framework for variant prioritization and the rigorous application of isogenic controls in cardiomyopathy research.

European Heart Journal OpenVol. 6(1)
Délégation Paris 5 (FR), University of Nottingham (GB), Inserm (FR), Utrecht University (NL), Heidelberg University (DE), University Hospital Heidelberg (DE), University Medical Center Utrecht (NL), Lithuanian Academy of Music and Theatre (LT), Maastricht University (NL), Sorbonne Université (FR), MSB Medical School Berlin (DE), Netherlands Heart Institute (NL), Amsterdam Neuroscience (NL), Pitié-Salpêtrière Hospital (FR), Amsterdam University Medical Centers (NL), Fondation pour l’innovation en Cadiométabolisme et Nutrition (FR), University of Amsterdam (NL), National Patient Safety Foundation (US)
Openalex Percentile: Top 65%
CRISPR and Genetic Engineering
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