Isomalabaricane Chemical Composition of Vietnamese Marine Sponges Inspected by Metabolomic and Chemical Approaches

Reliable taxonomy of biological producers is essential for finding new natural substances. A recent study morphologically re-examined 21 accessed vouchers to confirm multiple reported misidentifications and suggested marine sponges from the genus <i>Rhabdastrella</i> as the only known source of the isomalabaricane triterpenoids. The present study aimed to find isomalabaricane-containing sponges among the samples collected during seven marine expeditions to the Vietnam waters of the South China Sea, accompanied with their identification confirmed using morphological and molecular (18S rRNA and 28S rRNA) analyses. As a result, nine sponges identified as <i>Rhabdastrella globostellata</i> were found to contain isomalabaricanes in their extracts. A chemical investigation of the <i>R. globostellata</i> (PIBOC O63-136) specimen led to the isolation of nine isomalabaricane triterpenoids including the new compound <b>1</b>, of which the chemical structure was elucidated based on HRESIMS and NMR data. Subsequently, a combination of LC-MS/MS, multivariate statistical analysis, and feature-based molecular networking was applied to detect, annotate, and characterize the isomalabaricane chemical diversity across the nine <i>R. globostellata</i> specimens. As a result, two primary chemotypes containing individual sets of annotated compounds were discovered within the Vietnamese population of this sponge. Moreover, obtained data showed a series of new extremely rare isomalabaricanes in <i>R. globostellata</i> extracts including nitrogen-containing metabolites and glycosides of this structural class.

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Journal
Marine Drugs
Published
2025-12-05
DOI
https://doi.org/10.3390/md23120466
Citations
1
Primary Topic
Marine Sponges and Natural Products
Type
article
Field-Weighted Citation Impact
1.23
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article

Isomalabaricane Chemical Composition of Vietnamese Marine Sponges Inspected by Metabolomic and Chemical Approaches

Pavel S. Dmitrenok, Andrey D. Kukhlevskiy, V. A. Shilov, Roman S. Popov et al.
1 citations
Marine Drugs
Marine Sponges and Natural Products
1.23
article

Isomalabaricane Chemical Composition of Vietnamese Marine Sponges Inspected by Metabolomic and Chemical Approaches

Pavel S. Dmitrenok, Andrey D. Kukhlevskiy, V. A. Shilov, Roman S. Popov, Anastasia B. Kozhushnaya, Natalia V. Ivanchina, Sophia A. Kolesnikova, Anatoly I. Kalinovsky
article en
1 citations

Abstract

Reliable taxonomy of biological producers is essential for finding new natural substances. A recent study morphologically re-examined 21 accessed vouchers to confirm multiple reported misidentifications and suggested marine sponges from the genus <i>Rhabdastrella</i> as the only known source of the isomalabaricane triterpenoids. The present study aimed to find isomalabaricane-containing sponges among the samples collected during seven marine expeditions to the Vietnam waters of the South China Sea, accompanied with their identification confirmed using morphological and molecular (18S rRNA and 28S rRNA) analyses. As a result, nine sponges identified as <i>Rhabdastrella globostellata</i> were found to contain isomalabaricanes in their extracts. A chemical investigation of the <i>R. globostellata</i> (PIBOC O63-136) specimen led to the isolation of nine isomalabaricane triterpenoids including the new compound <b>1</b>, of which the chemical structure was elucidated based on HRESIMS and NMR data. Subsequently, a combination of LC-MS/MS, multivariate statistical analysis, and feature-based molecular networking was applied to detect, annotate, and characterize the isomalabaricane chemical diversity across the nine <i>R. globostellata</i> specimens. As a result, two primary chemotypes containing individual sets of annotated compounds were discovered within the Vietnamese population of this sponge. Moreover, obtained data showed a series of new extremely rare isomalabaricanes in <i>R. globostellata</i> extracts including nitrogen-containing metabolites and glycosides of this structural class.

Marine DrugsVol. 23(12)
Pacific Institute of Bioorganic Chemistry. GB Elyakova Far Eastern Branch of the Russian Academy of Sciences (RU), A.V. Zhirmunsky National Scientific Center of Marine Biology Far Eastern Branch of the Russian Academy of Sciences (RU)
Openalex Percentile: Top 16%
Marine Sponges and Natural Products
1.23
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