Optogenetic Control the Activity of Pyruvate Decarboxylase in <i>Saccharomyces cerevisiae</i> for Tunable Ethanol Production
<i>Saccharomyces cerevisiae</i> is a widely used chassis in metabolic engineering. Due to the Crabtree effect, it preferentially produces ethanol under high-glucose conditions, limiting the synthesis of other valuable metabolites. Conventional metabolic engineering approaches typically rely on irreversible genetic modifications, making it insufficient for dynamic metabolic control. In contrast, optogenetics offers a reversible and tunable method for regulating cellular metabolism with high temporal precision. In this study, we engineered the pyruvate decarboxylase isozyme 1 (Pdc1) by inserting the photosensory modules (AsLOV2 and cpLOV2 domains) into rationally selected positions within the enzyme. Through a growth phenotype-based screening system, we identified two blue light-responsive variants, OptoPdc1<sup>D1</sup> and OptoPdc1<sup>D2</sup>, which enable light-dependent control of enzymatic activity. Leveraging these OptoPdc1 variants, we developed opto-<i>S. cerevisiae</i> strains, MLy-9 and MLy-10, which demonstrated high efficiency in modulating both cell growth and ethanol production. These strains allow reliable regulation of ethanol biosynthesis in response to blue light, achieving a dynamic control range of approximately 20- to 120-fold. The opto-<i>S. cerevisiae</i> strains exhibited dose-dependent production in response to blue light intensity and pulse patterns, confirming their potential for precise metabolic control. This work establishes a novel protein-level strategy for regulating metabolic pathways in <i>S. cerevisiae</i> and introduces an effective method for controlling ethanol metabolism via optogenetic regulation.
Authors
- Qi Xiao (ORCID: https://orcid.org/0000-0002-2510-3036)
- Guoping Zhao (ORCID: https://orcid.org/0000-0002-7621-6620)
- Meizi Liu
- Yanfei Zhang (ORCID: https://orcid.org/0000-0003-2270-8483)
- Junjun Yan (ORCID: https://orcid.org/0000-0002-8824-0732)
- Yunhong Chen
Institutions
- Tianjin University of Science and Technology (CN)
- Chinese Academy of Sciences (CN)
- Intelligent Synthetic Biology Center (KR)
- State Key Laboratory of Synthetic Chemistry (CN)
- Tianjin Institute of Industrial Biotechnology (CN)
- Center for Excellence in Molecular Plant Sciences (CN)
- University of Chinese Academy of Sciences (CN)
Publication Details
- Journal
- ACS Synthetic Biology
- Published
- 2025-12-03
- DOI
- https://doi.org/10.1021/acssynbio.5c00411
- Primary Topic
- Light effects on plants
- Type
- article
- Field-Weighted Citation Impact
- 0.00