Chromosome-level genome assembly and annotation of the predatory stink bug Eocanthecona furcellata

The predatory stink bug, Eocanthecona furcellata, is a crucial biological control agent used globally to manage agricultural pests. Here, we present the chromosome-level genome assembly for this economically important species to provide a foundational resource for understanding its unique predatory biology. By integrating 41.94 Gb of PacBio HiFi, 56.12 Gb of Illumina, and 68.62 Gb of Hi-C sequencing data, we constructed a 1.10 Gb assembly with excellent contiguity (contig N50 = 42.08 Mb; scaffold N50 = 144.30 Mb). A total of 98.85% of the assembled sequences were anchored into eight pseudochromosomes. Genomic analysis revealed that repetitive elements comprise 41.46% of the genome, and we annotated 16,880 protein-coding genes, 98.74% of which were functionally assigned. The quality of the assembly is confirmed by its high completeness (BUSCO score = 98.8%; Merqury QV = 46.33). This high-quality genomic resource will be invaluable for future research into the molecular mechanisms of predation, insecticide resistance, and for optimizing the application of E. furcellata in integrated pest management programs.

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Journal
Scientific Data
Published
2025-12-05
DOI
https://doi.org/10.1038/s41597-025-06185-0
Primary Topic
Hemiptera Insect Studies
Type
article
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article

Chromosome-level genome assembly and annotation of the predatory stink bug Eocanthecona furcellata

De‐Long Guan, Yao Qin, Ying Qin, Wei Nai et al.
Scientific Data
Hemiptera Insect Studies
article

Chromosome-level genome assembly and annotation of the predatory stink bug Eocanthecona furcellata

De‐Long Guan, Yao Qin, Ying Qin, Wei Nai, Xiaodong Li, Xin Lei, S. M. Zhang
article en

Abstract

The predatory stink bug, Eocanthecona furcellata, is a crucial biological control agent used globally to manage agricultural pests. Here, we present the chromosome-level genome assembly for this economically important species to provide a foundational resource for understanding its unique predatory biology. By integrating 41.94 Gb of PacBio HiFi, 56.12 Gb of Illumina, and 68.62 Gb of Hi-C sequencing data, we constructed a 1.10 Gb assembly with excellent contiguity (contig N50 = 42.08 Mb; scaffold N50 = 144.30 Mb). A total of 98.85% of the assembled sequences were anchored into eight pseudochromosomes. Genomic analysis revealed that repetitive elements comprise 41.46% of the genome, and we annotated 16,880 protein-coding genes, 98.74% of which were functionally assigned. The quality of the assembly is confirmed by its high completeness (BUSCO score = 98.8%; Merqury QV = 46.33). This high-quality genomic resource will be invaluable for future research into the molecular mechanisms of predation, insecticide resistance, and for optimizing the application of E. furcellata in integrated pest management programs.

Scientific DataVol. 12(1)
Guangxi University (CN), Hechi University (CN)
Openalex Percentile: Top 71%
Hemiptera Insect Studies
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Chromosome-level genome assembly and annotation of the predatory stink bug Eocanthecona furcellata — De‐Long Guan, Yao Qin, et al. · Scientific Data (2025) | TGRS Research Map | TGRS