A chromosomal-level genome assembly of Aulacophora lewisii Baly, 1886 (Coleoptera: Chrysomelidae)

Aulacophora lewisii (Coleoptera: Chrysomelidae) is a specialist herbivore that primarily infests cucurbit crops, with larval feeding causing potentially severe damage during the seedling stage. However, the absence of a high-quality genome assembly has hindered progress in understanding its evolutionary history and the development of mechanism-based pest management strategies. In this study, we report a chromosome-level genome of A. lewisii generated by integrating sequencing data from PacBio, Illumina, and Hi-C. The assembled genome spans 1,642.79 Mb across 3,183 scaffolds, with a scaffold N50 of 55.13 Mb. A total of 90.65% (1,488.95 Mb) of the genome was successfully anchored to 28 chromosomes. BUSCO analysis using the insecta_odb10 dataset (n = 1,367) revealed the genome assembly completeness of 94.6%, including 89.7% single-copy and 4.9% duplicated BUSCOs. Repetitive sequences comprise 79.43% (1,304.88 Mb) of the genome, and 15,588 protein-coding genes were annotated. This high-quality reference genome provides an essential foundation for elucidating the ecological adaptations of A. lewisii and for informing the development of effective, genomics-driven pest control strategies.

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Journal
Scientific Data
Published
2025-12-05
DOI
https://doi.org/10.1038/s41597-025-06355-0
Primary Topic
Genomics and Phylogenetic Studies
Type
article
Field-Weighted Citation Impact
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article

A chromosomal-level genome assembly of Aulacophora lewisii Baly, 1886 (Coleoptera: Chrysomelidae)

Dan Zhang, Yanan Li, Jianfeng Jin, Bin Yu et al.
Scientific Data
Genomics and Phylogenetic Studies
article

A chromosomal-level genome assembly of Aulacophora lewisii Baly, 1886 (Coleoptera: Chrysomelidae)

Dan Zhang, Yanan Li, Jianfeng Jin, Bin Yu, Feifei Wang, Shengli Jing, Maolin Ye
article en

Abstract

Aulacophora lewisii (Coleoptera: Chrysomelidae) is a specialist herbivore that primarily infests cucurbit crops, with larval feeding causing potentially severe damage during the seedling stage. However, the absence of a high-quality genome assembly has hindered progress in understanding its evolutionary history and the development of mechanism-based pest management strategies. In this study, we report a chromosome-level genome of A. lewisii generated by integrating sequencing data from PacBio, Illumina, and Hi-C. The assembled genome spans 1,642.79 Mb across 3,183 scaffolds, with a scaffold N50 of 55.13 Mb. A total of 90.65% (1,488.95 Mb) of the genome was successfully anchored to 28 chromosomes. BUSCO analysis using the insecta_odb10 dataset (n = 1,367) revealed the genome assembly completeness of 94.6%, including 89.7% single-copy and 4.9% duplicated BUSCOs. Repetitive sequences comprise 79.43% (1,304.88 Mb) of the genome, and 15,588 protein-coding genes were annotated. This high-quality reference genome provides an essential foundation for elucidating the ecological adaptations of A. lewisii and for informing the development of effective, genomics-driven pest control strategies.

Scientific DataVol. 13(1)
South China Agricultural University (CN), Xinyang Normal University (CN), Shandong University of Political Science and Law (CN)
National Natural Science Foundation of China, Xinyang Normal University, Nanhu Scholars Program for Young Scholars of Xinyang Normal University
Openalex Percentile: Top 65%
Genomics and Phylogenetic Studies
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