Engineering ω-transaminase for efficient dihydroxyacetone transamination in serinol biosynthesis starting from methanol

Serinol (2-amino-1,3-propanediol) is an important pharmaceutical intermediate, but conventional chemical or microbial routes are hampered by high energy demand, product toxicity, or complex regulation. Here, we report a modular cell-free enzyme cascade, termed the methanol-to-serinol pathway (MSP), that efficiently converts methanol-a low-cost C1 feedstock-into serinol with high carbon yield. The cascade comprises two modules: Module 1 employs an alcohol oxidase and an engineered formolase to generate dihydroxyacetone (DHA), while Module 2 uses a tailored ω-transaminase for direct one-step amination. To overcome the rate-limiting DHA amination, we applied an "ALF" scanning strategy and identified a triple-mutant Cv-ωTA (Y153F/Y168F/C418F) with 6.3-fold higher specific activity than the wild type. Fitness landscape analysis revealed strong non-additive interactions, highlighting the synergistic effect of these three mutations. Molecular dynamics simulations revealed structural changes underlying the activity boost. By incorporating a pyruvate-removal system to drive the equilibrium toward product formation, the integrated cascade achieved 43.86 mM (4 g/L) serinol from 150 mM methanol in 7 h, corresponding to 87.7 % carbon yield and a productivity of 0.57 g/L/h. This work establishes a carbon-efficient route for serinol biosynthesis and provides a generalizable strategy for sustainable C1 biomanufacturing.

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Journal
Synthetic and Systems Biotechnology
Published
2025-11-20
DOI
https://doi.org/10.1016/j.synbio.2025.11.004
Citations
1
Primary Topic
Enzyme Catalysis and Immobilization
Type
article
Field-Weighted Citation Impact
0.81
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article

Engineering ω-transaminase for efficient dihydroxyacetone transamination in serinol biosynthesis starting from methanol

Changhong Guo, Lizhen Deng, Shewei Hu, Yehui Bie et al.
1 citations
Synthetic and Systems Biotechnology
Enzyme Catalysis and Immobilization
0.81
article

Engineering ω-transaminase for efficient dihydroxyacetone transamination in serinol biosynthesis starting from methanol

Changhong Guo, Lizhen Deng, Shewei Hu, Yehui Bie, Dongda Zhang, Ruiqi Zeng, Long‐Jiang Yu, Gen Lu, Zeyang Li, Yuxin He, Ya Wu, Xudong Xu
article en
1 citations

Abstract

Serinol (2-amino-1,3-propanediol) is an important pharmaceutical intermediate, but conventional chemical or microbial routes are hampered by high energy demand, product toxicity, or complex regulation. Here, we report a modular cell-free enzyme cascade, termed the methanol-to-serinol pathway (MSP), that efficiently converts methanol-a low-cost C1 feedstock-into serinol with high carbon yield. The cascade comprises two modules: Module 1 employs an alcohol oxidase and an engineered formolase to generate dihydroxyacetone (DHA), while Module 2 uses a tailored ω-transaminase for direct one-step amination. To overcome the rate-limiting DHA amination, we applied an "ALF" scanning strategy and identified a triple-mutant Cv-ωTA (Y153F/Y168F/C418F) with 6.3-fold higher specific activity than the wild type. Fitness landscape analysis revealed strong non-additive interactions, highlighting the synergistic effect of these three mutations. Molecular dynamics simulations revealed structural changes underlying the activity boost. By incorporating a pyruvate-removal system to drive the equilibrium toward product formation, the integrated cascade achieved 43.86 mM (4 g/L) serinol from 150 mM methanol in 7 h, corresponding to 87.7 % carbon yield and a productivity of 0.57 g/L/h. This work establishes a carbon-efficient route for serinol biosynthesis and provides a generalizable strategy for sustainable C1 biomanufacturing.

Synthetic and Systems BiotechnologyVol. 12
Bozhou People's Hospital (CN), Huazhong University of Science and Technology (CN)
Openalex Percentile: Top 21%
Enzyme Catalysis and Immobilization
0.81
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