A streamlined protocol for high-quality RNA extraction from bread dough

Bread dough is rich in polysaccharides and polyphenols, which hinder RNA extraction. We therefore established a streamlined workflow combining Fruit-mate homogenization, clarification, TRIzol extraction, high-salt precipitation, and activated-charcoal cleanup. This protocol reproducibly yields intact RNA of sufficient purity, enabling transcriptomic analyses of yeast activity in complex dough environments.

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Publication Details

Journal
Journal of Microbiological Methods
Published
2025-12-04
DOI
https://doi.org/10.1016/j.mimet.2025.107352
Primary Topic
Fermentation and Sensory Analysis
Type
article
Field-Weighted Citation Impact
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article

A streamlined protocol for high-quality RNA extraction from bread dough

Shuhei Ota, Shota Isogai, Hiroshi Takagi, Akira Nishimura
Journal of Microbiological Methods
Fermentation and Sensory Analysis
article

A streamlined protocol for high-quality RNA extraction from bread dough

Shuhei Ota, Shota Isogai, Hiroshi Takagi, Akira Nishimura
article en

Abstract

Bread dough is rich in polysaccharides and polyphenols, which hinder RNA extraction. We therefore established a streamlined workflow combining Fruit-mate homogenization, clarification, TRIzol extraction, high-salt precipitation, and activated-charcoal cleanup. This protocol reproducibly yields intact RNA of sufficient purity, enabling transcriptomic analyses of yeast activity in complex dough environments.

Journal of Microbiological MethodsVol. 240
Nara Institute of Science and Technology (JP)
Openalex Percentile: Top 56%
Fermentation and Sensory Analysis
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