A streamlined protocol for high-quality RNA extraction from bread dough
Bread dough is rich in polysaccharides and polyphenols, which hinder RNA extraction. We therefore established a streamlined workflow combining Fruit-mate homogenization, clarification, TRIzol extraction, high-salt precipitation, and activated-charcoal cleanup. This protocol reproducibly yields intact RNA of sufficient purity, enabling transcriptomic analyses of yeast activity in complex dough environments.
Authors
- Shuhei Ota (ORCID: https://orcid.org/0000-0003-4349-3047)
- Shota Isogai (ORCID: https://orcid.org/0000-0001-7697-7502)
- Hiroshi Takagi (ORCID: https://orcid.org/0000-0002-1786-3174)
- Akira Nishimura (ORCID: https://orcid.org/0000-0002-0168-9829)
Institutions
- Nara Institute of Science and Technology (JP)
Publication Details
- Journal
- Journal of Microbiological Methods
- Published
- 2025-12-04
- DOI
- https://doi.org/10.1016/j.mimet.2025.107352
- Primary Topic
- Fermentation and Sensory Analysis
- Type
- article
- Field-Weighted Citation Impact
- 0.00