Graph-Convolutional-Beta-VAE for synthetic abdominal aortic aneurysm generation

Synthetic data generation plays a crucial role in medical research by mitigating privacy concerns and enabling large-scale patient data analysis. This study presents a Graph Convolutional Neural Network combined with a Beta-Variational Autoencoder (GCN-β-VAE) framework for generating synthetic Abdominal Aortic Aneurysms (AAA). Using a small real-world dataset, our approach extracts key anatomical features and captures complex statistical relationships within a compact disentangled latent space. To address data limitations, low-impact data augmentation based on Procrustes analysis was employed, preserving anatomical integrity. The generation strategies, both deterministic and stochastic, manage to enhance data diversity while ensuring realism. Compared to PCA-based approaches, our model performs more robustly on unseen data by capturing complex, nonlinear anatomical variations. This enables more comprehensive clinical and statistical analyses than the original dataset alone. The resulting synthetic AAA dataset preserves patient privacy while providing a scalable foundation for medical research, device testing, and computational modeling.

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Publication Details

Journal
Medical & Biological Engineering & Computing
Published
2025-12-04
DOI
https://doi.org/10.1007/s11517-025-03491-y
Citations
1
Primary Topic
Aortic aneurysm repair treatments
Type
article
Field-Weighted Citation Impact
1.52
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Graph-Convolutional-Beta-VAE for synthetic abdominal aortic aneurysm generation

Francesco Viola, Francesco Tudisco, Francesco� Fabbri, Martino Andrea Scarpolini et al.
1 citations
Medical & Biological Engineering & Computing
Aortic aneurysm repair treatments
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article

Graph-Convolutional-Beta-VAE for synthetic abdominal aortic aneurysm generation

Francesco Viola, Francesco Tudisco, Francesco� Fabbri, Martino Andrea Scarpolini, Angelo Iollo
article en
1 citations

Abstract

Synthetic data generation plays a crucial role in medical research by mitigating privacy concerns and enabling large-scale patient data analysis. This study presents a Graph Convolutional Neural Network combined with a Beta-Variational Autoencoder (GCN-β-VAE) framework for generating synthetic Abdominal Aortic Aneurysms (AAA). Using a small real-world dataset, our approach extracts key anatomical features and captures complex statistical relationships within a compact disentangled latent space. To address data limitations, low-impact data augmentation based on Procrustes analysis was employed, preserving anatomical integrity. The generation strategies, both deterministic and stochastic, manage to enhance data diversity while ensuring realism. Compared to PCA-based approaches, our model performs more robustly on unseen data by capturing complex, nonlinear anatomical variations. This enables more comprehensive clinical and statistical analyses than the original dataset alone. The resulting synthetic AAA dataset preserves patient privacy while providing a scalable foundation for medical research, device testing, and computational modeling.

Medical & Biological Engineering & Computing
University of Rome Tor Vergata (IT), Centre National de la Recherche Scientifique (FR), Université de Bordeaux (FR), Gran Sasso Science Institute (IT), Institut de Mathématiques de Bordeaux (FR), University of Edinburgh (GB)
Openalex Percentile: Top 12%
Aortic aneurysm repair treatments
1.52
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