Genetic Diversity of Rhodiola quadrifida (Crassulaceae) in Altai High-Mountain Populations of Kazakhstan

<b>Background:</b><i>Rhodiola quadrifida</i> (Pall.) Fisch. & C.A. Mey. (Crassulaceae) is a rare medicinal species in the Kazakh Altai, yet information on its population structure and genetic diversity remains limited. This study presents findings from an investigation of natural <i>R. quadrifida</i> populations. <b>Methods:</b> The morphometric characteristics, population age structure, and genetic diversity of the plants were analysed using PCR-based genome profiling. Genetic diversity within <i>R. quadrifida</i> populations was assessed using PCR primers for binding sites complementary to a specific region at the 3' terminus of a particular tRNA. <b>Results:</b> The populations exhibited variations in morphological traits, age structures, and reproductive strategies. The IVA-1, IVA-2 and KOK populations represent the most mature stages, characterized by a dominance of vegetative reproduction and a disturbed age structure, with a predominance of senile and virgin individuals. In contrast, the LIN-1 and LIN-2 population is characterized by a balanced age structure, encompassing all ontogenetic groups, and a mixed reproductive system that includes both sexual and vegetative propagation. Genetic diversity, as measured by Shannon's information index, ranged from 0.194 to 0.247, indicating low genetic diversity in <i>R. quadrifida</i>. Analysis of molecular variance (AMOVA) revealed significantly greater variation within populations (62%) than among populations (38%). Genetic diversity was higher in the LIN-1 and LIN-2 populations, which employs a mixed reproductive system (clonal and seeds), than in populations dominated by vegetative reproduction. Both LIN populations, characterized by a mixed reproductive system, exhibited higher genetic diversity than the KOK, IVA-1 and IVA-2 populations, where vegetative reproduction predominated. <b>Conclusions:</b> These results underscore the necessity for priority conservation measures, including monitoring population size and age structure in populations with low levels of seed reproduction and disturbed age structure. Additional measures include supporting <i>in situ</i> and <i>ex situ</i> conservation, such as clonal collection, seed banks, and tissue cultures, as well as restricting the harvesting of medicinal raw materials.

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Journal
Genes
Published
2025-12-03
DOI
https://doi.org/10.3390/genes16121449
Primary Topic
Medicinal Plants and Bioactive Compounds
Type
article
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article

Genetic Diversity of Rhodiola quadrifida (Crassulaceae) in Altai High-Mountain Populations of Kazakhstan

Damelya Tagimanova, Olesya Raiser, Vladislav Shevtsov, Айнур Туржанова et al.
Genes
Medicinal Plants and Bioactive Compounds
article

Genetic Diversity of Rhodiola quadrifida (Crassulaceae) in Altai High-Mountain Populations of Kazakhstan

Damelya Tagimanova, Olesya Raiser, Vladislav Shevtsov, Айнур Туржанова, Oxana Khapilina, Молдир Жумагул, Serik A. Kubentayev, Saule Magzumova
article en

Abstract

<b>Background:</b><i>Rhodiola quadrifida</i> (Pall.) Fisch. & C.A. Mey. (Crassulaceae) is a rare medicinal species in the Kazakh Altai, yet information on its population structure and genetic diversity remains limited. This study presents findings from an investigation of natural <i>R. quadrifida</i> populations. <b>Methods:</b> The morphometric characteristics, population age structure, and genetic diversity of the plants were analysed using PCR-based genome profiling. Genetic diversity within <i>R. quadrifida</i> populations was assessed using PCR primers for binding sites complementary to a specific region at the 3' terminus of a particular tRNA. <b>Results:</b> The populations exhibited variations in morphological traits, age structures, and reproductive strategies. The IVA-1, IVA-2 and KOK populations represent the most mature stages, characterized by a dominance of vegetative reproduction and a disturbed age structure, with a predominance of senile and virgin individuals. In contrast, the LIN-1 and LIN-2 population is characterized by a balanced age structure, encompassing all ontogenetic groups, and a mixed reproductive system that includes both sexual and vegetative propagation. Genetic diversity, as measured by Shannon's information index, ranged from 0.194 to 0.247, indicating low genetic diversity in <i>R. quadrifida</i>. Analysis of molecular variance (AMOVA) revealed significantly greater variation within populations (62%) than among populations (38%). Genetic diversity was higher in the LIN-1 and LIN-2 populations, which employs a mixed reproductive system (clonal and seeds), than in populations dominated by vegetative reproduction. Both LIN populations, characterized by a mixed reproductive system, exhibited higher genetic diversity than the KOK, IVA-1 and IVA-2 populations, where vegetative reproduction predominated. <b>Conclusions:</b> These results underscore the necessity for priority conservation measures, including monitoring population size and age structure in populations with low levels of seed reproduction and disturbed age structure. Additional measures include supporting <i>in situ</i> and <i>ex situ</i> conservation, such as clonal collection, seed banks, and tissue cultures, as well as restricting the harvesting of medicinal raw materials.

GenesVol. 16(12)
National Center for Biotechnology (KZ), Astana Medical University (KZ), Astana International University
Openalex Percentile: Top 66%
Medicinal Plants and Bioactive Compounds
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