Cryptic Divergence of Rochia nilotica (Gastropoda: Tegulidae) from Chuuk Lagoon, Federated States of Micronesia, Revealed by Morphological and Mitochondrial Genome Analyses

<i>Rochia nilotica</i> is a tropical Pacific gastropod inhabiting shallow coral reef habitats and supporting important marine resources in Pacific island nations. In this study, we analyzed specimens collected from Weno Island, Chuuk Atoll, Federation States of Micronesia (FSM), using an integrative approach that combined morphological characteristics, molecular phylogenetics (COX1 and 16S rRNA), and complete mitochondrial genome analysis. While the Chuuk population exhibited morphological features consistent with <i>R. nilotica</i>, molecular data revealed substantial genetic divergence. Phylogenetic analyses based on the complete mitochondrial genome (17,664 bp) clustered the Chuuk specimen with <i>Rochia virgata</i>. Phylogenies inferred from concatenated COX1 and 16S rRNA gene sequences yielded congruent topologies, placing the Chuuk lineage within the <i>Rochia</i> clade but clearly separated from other <i>R. nilotica</i> populations in New Caledonia and Mo'orea Island, French Polynesia. This genetic divergence is likely driven by the long-term geographic isolation of Chuuk Atoll. The lagoon's fringing reefs descend rapidly into waters exceeding 4000 m, which may act as a barrier to restricting larval dispersal. Combined with the extremely short planktonic larval duration of <i>R. nilotica</i> (approximately four days), such environmental isolation may promote the formation of a distinct gene pool. Despite morphological uniformity, the observed genetic divergence suggests that the Chuuk population may represent a cryptic species. Our study provides a complete mitochondrial genome and offers robust phylogenetic framework that provides an understanding of species boundaries within <i>Rochia</i>. These findings underscore the importance of integrating genomic and morphological data for accurate species identification and have implications for conservation and sustainable aquaculture practices in geographically isolated reef ecosystems.