Genome-Wide Identification and Characterization of the Trihelix Transcription Factor Family in Pinus massoniana and Gene Expression Patterns Analysis

<i>Pinus massoniana</i> Lamb. possesses considerable ecological and economic value. However, the rapid proliferation of pine wilt disease poses a significant threat to the growth and development of coniferous plants. Transcription factors play a crucial role in enabling plants to respond to external environmental stresses. The trihelix transcription factor (TTF) family, named after its unique trihelical domain (helix-loop-helix-loop-helix) and also referred to as the GT family, plays crucial roles in plant morphogenesis and in responses to biotic and abiotic stresses. In this study, we identified 56 <i>PmGTs</i> from the <i>P. massoniana</i> genome and analyzed their expression profiles in response to pine wood nematode (PWN) infection. Eight significantly differentially expressed <i>PmGTs</i> at various stages were selected as candidate genes for PWN resistance. Promoter analysis and qRT-PCR revealed that these genes respond to multiple treatments, including methyl jasmonate (MeJA), indole-3-acetic acid (IAA), gibberellic acid (GA3), salicylic acid (SA), and abscisic acid (ABA). Subcellular localization analysis revealed that the proteins are localized in the nucleus. Additionally, seven <i>PmGTs</i> exhibit transcriptional activity. This study provides a foundational understanding of the role of <i>PmGTs</i> in stress response in <i>P. massoniana</i>.

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Journal
Plants
Published
2025-11-28
DOI
https://doi.org/10.3390/plants14233635
Primary Topic
Nematode management and characterization studies
Type
article
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article

Genome-Wide Identification and Characterization of the Trihelix Transcription Factor Family in Pinus massoniana and Gene Expression Patterns Analysis

Kongshu Ji, Dengbao Wang, Shuo Sun, Peng‐Cheng Liu et al.
Plants
Nematode management and characterization studies
article

Genome-Wide Identification and Characterization of the Trihelix Transcription Factor Family in Pinus massoniana and Gene Expression Patterns Analysis

Kongshu Ji, Dengbao Wang, Shuo Sun, Peng‐Cheng Liu, Manli Yang, Shaojun Xu, Meijing Chen
article en

Abstract

<i>Pinus massoniana</i> Lamb. possesses considerable ecological and economic value. However, the rapid proliferation of pine wilt disease poses a significant threat to the growth and development of coniferous plants. Transcription factors play a crucial role in enabling plants to respond to external environmental stresses. The trihelix transcription factor (TTF) family, named after its unique trihelical domain (helix-loop-helix-loop-helix) and also referred to as the GT family, plays crucial roles in plant morphogenesis and in responses to biotic and abiotic stresses. In this study, we identified 56 <i>PmGTs</i> from the <i>P. massoniana</i> genome and analyzed their expression profiles in response to pine wood nematode (PWN) infection. Eight significantly differentially expressed <i>PmGTs</i> at various stages were selected as candidate genes for PWN resistance. Promoter analysis and qRT-PCR revealed that these genes respond to multiple treatments, including methyl jasmonate (MeJA), indole-3-acetic acid (IAA), gibberellic acid (GA3), salicylic acid (SA), and abscisic acid (ABA). Subcellular localization analysis revealed that the proteins are localized in the nucleus. Additionally, seven <i>PmGTs</i> exhibit transcriptional activity. This study provides a foundational understanding of the role of <i>PmGTs</i> in stress response in <i>P. massoniana</i>.

PlantsVol. 14(23)
Nanjing Forestry University (CN), State Forestry and Grassland Administration (CN)
Openalex Percentile: Top 72%
Nematode management and characterization studies
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Genome-Wide Identification and Characterization of the Trihelix Transcription Factor Family in Pinus massoniana and Gene Expression Patterns Analysis — Kongshu Ji, Dengbao Wang, et al. · Plants (2025) | TGRS Research Map | TGRS