polars-bio—fast, scalable, and out-of-core operations on large genomic interval datasets

polars-bio is an open-source Python package distributed under the Apache License available for major platforms, including Linux, macOS, and Windows in the PyPI registry. The online documentation is https://biodatageeks.org/polars-bio/ and the source code is available on GitHub: https://github.com/biodatageeks/polars-bio and Zenodo: https://doi.org/10.5281/zenodo.16374290. are available at Bioinformatics online.

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Publication Details

Journal
Bioinformatics
Published
2025-11-28
DOI
https://doi.org/10.1093/bioinformatics/btaf640
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
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article

polars-bio—fast, scalable, and out-of-core operations on large genomic interval datasets

Marek Wiewiórka, Marek Zbysiński, Tomasz Gambin, Pavel Khamutou
Bioinformatics
Single-cell and spatial transcriptomics
article

polars-bio—fast, scalable, and out-of-core operations on large genomic interval datasets

Marek Wiewiórka, Marek Zbysiński, Tomasz Gambin, Pavel Khamutou
article en

Abstract

polars-bio is an open-source Python package distributed under the Apache License available for major platforms, including Linux, macOS, and Windows in the PyPI registry. The online documentation is https://biodatageeks.org/polars-bio/ and the source code is available on GitHub: https://github.com/biodatageeks/polars-bio and Zenodo: https://doi.org/10.5281/zenodo.16374290. are available at Bioinformatics online.

BioinformaticsVol. 41(12)
Warsaw University of Technology (PL), University of Oxford (GB), Science Oxford (GB)
Openalex Percentile: Top 66%
Single-cell and spatial transcriptomics
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