The LFR-SWI/SNF complex: A chromatin wrench safeguarding cellular quiescence in the <i>Arabidopsis</i> root stem cell organizer

The quiescent center (QC) resides in a reversible G<sub>0</sub> state in which cells are not actively dividing and yet retain their proliferation competence upon stimulation. How this quiescent state is molecularly defined and stably maintained is a fascinating question. Here, we uncover a dual role for LEAF AND FLOWER RELATED (LFR), a component of the SWITCH/SUCROSE NONFERMENTABLE (SWI/SNF) chromatin-remodeling complex, in maintaining quiescence of the QC. We demonstrate that LFR is recruited to the chromatin of core transcription factors (TFs) PLETHORA 1 (PLT1), PLT2, SCARECROW (SCR), and WUSCHEL<i>-</i>RELATED HOMEOBOX (WOX5) via physical interactions with them. Moreover, the autoregulatory binding of these TFs reciprocally requires LFR. Functioning as a chromatin wrench, LFR relaxes the chromatin at <i>PLT1</i>, <i>PLT2</i>, and <i>SCR</i> loci to sustain their positive autoregulation, thereby contributing to the prevention of QC cell division. Conversely, LFR compacts <i>WOX5</i> chromatin to enforce negative autoregulation and simultaneously promotes <i>CYCD3;3</i> expression to counteract WOX5-mediated repression, thus ensuring the proliferation competence of the QC. Furthermore, WOX5 throws a wrench into LFR binding at the <i>CYCD3;3</i> promoter, establishing a regulatory circuit that precisely modulates <i>CYCD3;3</i> expression, a D-type cyclin whose appropriate level is critical for QC quiescence. Consequently, the QC is maintained in a proliferation-competent but arrested state. Our findings establish the LFR-containing SWI/SNF complex as a key regulatory node that coordinates TF autoregulation with cell-cycle control to maintain QC quiescence.

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Journal
Proceedings of the National Academy of Sciences
Published
2025-12-02
DOI
https://doi.org/10.1073/pnas.2520692122
Primary Topic
Plant Molecular Biology Research
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article
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article

The LFR-SWI/SNF complex: A chromatin wrench safeguarding cellular quiescence in the Arabidopsis root stem cell organizer

Xigang Liu, Wenqiang Tang, Qionglei Fang, Sujuan Cui et al.
Proceedings of the National Academy of Sciences
Plant Molecular Biology Research
article

The LFR-SWI/SNF complex: A chromatin wrench safeguarding cellular quiescence in the Arabidopsis root stem cell organizer

Xigang Liu, Wenqiang Tang, Qionglei Fang, Sujuan Cui, Hongtao Zhao, Jiayu Li, Hao Zhang, Xiaolei Shi, Xiaoyun Li, Muhammad Assad Aslam, Yan Long, Shuge Wang, Mengmeng Li, Qiang Chen
article en

Abstract

The quiescent center (QC) resides in a reversible G<sub>0</sub> state in which cells are not actively dividing and yet retain their proliferation competence upon stimulation. How this quiescent state is molecularly defined and stably maintained is a fascinating question. Here, we uncover a dual role for LEAF AND FLOWER RELATED (LFR), a component of the SWITCH/SUCROSE NONFERMENTABLE (SWI/SNF) chromatin-remodeling complex, in maintaining quiescence of the QC. We demonstrate that LFR is recruited to the chromatin of core transcription factors (TFs) PLETHORA 1 (PLT1), PLT2, SCARECROW (SCR), and WUSCHEL<i>-</i>RELATED HOMEOBOX (WOX5) via physical interactions with them. Moreover, the autoregulatory binding of these TFs reciprocally requires LFR. Functioning as a chromatin wrench, LFR relaxes the chromatin at <i>PLT1</i>, <i>PLT2</i>, and <i>SCR</i> loci to sustain their positive autoregulation, thereby contributing to the prevention of QC cell division. Conversely, LFR compacts <i>WOX5</i> chromatin to enforce negative autoregulation and simultaneously promotes <i>CYCD3;3</i> expression to counteract WOX5-mediated repression, thus ensuring the proliferation competence of the QC. Furthermore, WOX5 throws a wrench into LFR binding at the <i>CYCD3;3</i> promoter, establishing a regulatory circuit that precisely modulates <i>CYCD3;3</i> expression, a D-type cyclin whose appropriate level is critical for QC quiescence. Consequently, the QC is maintained in a proliferation-competent but arrested state. Our findings establish the LFR-containing SWI/SNF complex as a key regulatory node that coordinates TF autoregulation with cell-cycle control to maintain QC quiescence.

Proceedings of the National Academy of SciencesVol. 122(49)
Hebei Academy of Agriculture and Forestry Sciences (CN), Hebei Normal University (CN)
Openalex Percentile: Top 72%
Plant Molecular Biology Research
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