PEGylated Graphene Oxide Enhances <i>In Vitro</i> Transcription by Suppressing RNA Rebinding to T7 Polymerase

<i>In vitro</i> transcription (IVT) using T7 RNA polymerase is a key step in mRNA synthesis for therapeutic applications. However, the generation of double-stranded RNA (dsRNA) byproducts during IVT─primarily due to RNA rebinding and self-priming─triggers innate immune responses and reduces translation efficiency. Here, we present a simple and effective strategy to minimize dsRNA formation during IVT by incorporating PEGylated graphene oxide (PEG-GO). Graphene oxide (GO) preferentially binds single-stranded nucleic acids, but its use is limited by protein adsorption and low solubility in Mg<sup>2</sup><sup>+</sup>-containing buffers. PEG modification improves GO's dispersibility and reduces protein binding, allowing selective sequestration of nascent RNA without inhibiting T7 RNA polymerase activity. The addition of PEG-GO to the IVT reaction reduced the dsRNA content by over 75% while maintaining RNA yield and accelerating transcription kinetics. Moreover, mRNA synthesized in the presence of PEG-GO showed enhanced protein expression and reduced interferon-β secretion in transfected cells, comparable to post-IVT-purified mRNA. Our work demonstrates PEG-GO as a practical additive for improving the quality and scalability of IVT-based mRNA production.

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Publication Details

Journal
Bioconjugate Chemistry
Published
2025-12-02
DOI
https://doi.org/10.1021/acs.bioconjchem.5c00380
Primary Topic
RNA Interference and Gene Delivery
Type
article
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article

PEGylated Graphene Oxide Enhances In Vitro Transcription by Suppressing RNA Rebinding to T7 Polymerase

Goeun Lee, Khushbu Chauhan, Dong‐Eun Kim, Junhyung Ryu et al.
Bioconjugate Chemistry
RNA Interference and Gene Delivery
article

PEGylated Graphene Oxide Enhances In Vitro Transcription by Suppressing RNA Rebinding to T7 Polymerase

Goeun Lee, Khushbu Chauhan, Dong‐Eun Kim, Junhyung Ryu, Jinmin Jang
article en

Abstract

<i>In vitro</i> transcription (IVT) using T7 RNA polymerase is a key step in mRNA synthesis for therapeutic applications. However, the generation of double-stranded RNA (dsRNA) byproducts during IVT─primarily due to RNA rebinding and self-priming─triggers innate immune responses and reduces translation efficiency. Here, we present a simple and effective strategy to minimize dsRNA formation during IVT by incorporating PEGylated graphene oxide (PEG-GO). Graphene oxide (GO) preferentially binds single-stranded nucleic acids, but its use is limited by protein adsorption and low solubility in Mg<sup>2</sup><sup>+</sup>-containing buffers. PEG modification improves GO's dispersibility and reduces protein binding, allowing selective sequestration of nascent RNA without inhibiting T7 RNA polymerase activity. The addition of PEG-GO to the IVT reaction reduced the dsRNA content by over 75% while maintaining RNA yield and accelerating transcription kinetics. Moreover, mRNA synthesized in the presence of PEG-GO showed enhanced protein expression and reduced interferon-β secretion in transfected cells, comparable to post-IVT-purified mRNA. Our work demonstrates PEG-GO as a practical additive for improving the quality and scalability of IVT-based mRNA production.

Bioconjugate ChemistryVol. 36(12)
Konkuk University (KR), Daewon Pharm (South Korea) (KR)
Openalex Percentile: Top 66%
RNA Interference and Gene Delivery
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