Cheminformatic analysis of protein surfaces provides binding site insights and informs identification strategies

This work offers interpretable composition-interaction relationships and practical tool for binding site characterization. To facilitate application, we provide a free, open-source, fast, bindingsite identification tool (AABS), available at https://gitlab.com/Jukic/aabs. We anticipate that these findings and tool will advance binding site prediction and accelerate computationally intensive drug discovery within medicinal chemistry.

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Publication Details

Journal
Future Medicinal Chemistry
Published
2025-12-02
DOI
https://doi.org/10.1080/17568919.2025.2592531
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
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article

Cheminformatic analysis of protein surfaces provides binding site insights and informs identification strategies

Urban Bren, Marko Jukič, Jure Pražnikar, Andrej Milisavljević
Future Medicinal Chemistry
Computational Drug Discovery Methods
article

Cheminformatic analysis of protein surfaces provides binding site insights and informs identification strategies

Urban Bren, Marko Jukič, Jure Pražnikar, Andrej Milisavljević
article en

Abstract

This work offers interpretable composition-interaction relationships and practical tool for binding site characterization. To facilitate application, we provide a free, open-source, fast, bindingsite identification tool (AABS), available at https://gitlab.com/Jukic/aabs. We anticipate that these findings and tool will advance binding site prediction and accelerate computationally intensive drug discovery within medicinal chemistry.

Future Medicinal ChemistryVol. 17(24)
University of Primorska (SI), University of Maribor (SI), Institute for Environmental Protection and Sensors (SI), Institute of Environmental Protection (PL)
Openalex Percentile: Top 62%
Computational Drug Discovery Methods
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