Integrative Metabolomic, Network Pharmacology, and Experimental Evidence for Lepidium sativum Seed Extract as a Natural Modulator of Pulmonary Fibrosis via the ncNRFR/Let-7d Regulatory Pathway

<b>Background/Objectives</b>: Pulmonary fibrosis (PF) is a progressive interstitial lung disease with limited therapeutic options. <i>Lepidium sativum</i> (cress seeds) possess recognized antioxidant and anti-inflammatory properties, yet its potential antifibrotic activity has not been investigated. This study evaluated the phytochemical composition and antifibrotic efficacy of cress seed extract (CSE) and examined whether its effects are associated with modulation of the <i>ncNRFR/let-7d</i> pathway in methotrexate (Mtx)-induced PF. <b>Methods</b>: Comprehensive metabolite profiling was performed using GC-MS, HPLC, and UPLC-T-TOF-MS/MS. Antioxidant capacity and antiproliferative effects were assessed in vitro. Network pharmacology was used to identify CSE-related PF targets and regulatory pathways. In vivo, PF was induced in adult male Wistar rats by Mtx, followed by oral CSE administration (50-150 mg/kg). Biochemical markers of inflammation, oxidative stress, extracellular matrix deposition, EMT, and ncRNA expression (<i>ncNRFR</i> and <i>let-7d</i>) were quantified alongside histopathology and immunohistochemistry. <b>Results</b>: CSE contained diverse terpenes, phenolics, flavonoids, glucosinolates, and amino acid derivatives. It exhibited potent antioxidant activity and antiproliferative effects against A549 and Hep2 lung cancer cells. Network analysis identified 997 overlapping CSE-PF targets and highlighted IL6 and MMP1 as relevant <i>miR-let-7d</i>-associated nodes. In vivo, Mtx-induced marked fibrosis characterized by increased <i>ncNRFR</i>, reduced <i>let-7d</i>, elevated IL6, HMGB1, TGF-β, MMP1, collagen, and hydroxyproline, and reduced antioxidant enzyme activity. CSE treatment dose-dependently mitigated these alterations, improved histoarchitecture, and reduced collagen deposition. <b>Conclusions</b>: CSE showed antifibrotic, antioxidant, and anti-inflammatory activity in MTX-induced PF in rats and modulated the reciprocal expression patterns of <i>ncNRFR</i> and <i>let-7d</i>. These findings support CSE as a potential source of bioactive constituents for PF management and identify the putative <i>ncNRFR-let-7d</i> regulatory relationship as a novel pathway in fibrotic lung disease, warranting further mechanistic investigation.

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Journal
Pharmaceuticals
Published
2025-11-28
DOI
https://doi.org/10.3390/ph18121820
Primary Topic
Food Science and Nutritional Studies
Type
article
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article

Integrative Metabolomic, Network Pharmacology, and Experimental Evidence for Lepidium sativum Seed Extract as a Natural Modulator of Pulmonary Fibrosis via the ncNRFR/Let-7d Regulatory Pathway

Ibrahim M. Alanazi, Ghazi A. Bamagous, Essa M. Saied, Doaa I. Mohamed et al.
Pharmaceuticals
Food Science and Nutritional Studies
article

Integrative Metabolomic, Network Pharmacology, and Experimental Evidence for Lepidium sativum Seed Extract as a Natural Modulator of Pulmonary Fibrosis via the ncNRFR/Let-7d Regulatory Pathway

Ibrahim M. Alanazi, Ghazi A. Bamagous, Essa M. Saied, Doaa I. Mohamed, Tarek A. Yousef, Sanchaita Rajkhowa, Yaser Hosny Ali Elewa, Hebatallah H. Abo Nahas, Ibrahim Abdel Aziz Ibrahim, Alaa Hisham Falemban, Nora Hosny, Maha Alsunbul, Manisha Agarwal, Emad Rashad Sindi
article en

Abstract

<b>Background/Objectives</b>: Pulmonary fibrosis (PF) is a progressive interstitial lung disease with limited therapeutic options. <i>Lepidium sativum</i> (cress seeds) possess recognized antioxidant and anti-inflammatory properties, yet its potential antifibrotic activity has not been investigated. This study evaluated the phytochemical composition and antifibrotic efficacy of cress seed extract (CSE) and examined whether its effects are associated with modulation of the <i>ncNRFR/let-7d</i> pathway in methotrexate (Mtx)-induced PF. <b>Methods</b>: Comprehensive metabolite profiling was performed using GC-MS, HPLC, and UPLC-T-TOF-MS/MS. Antioxidant capacity and antiproliferative effects were assessed in vitro. Network pharmacology was used to identify CSE-related PF targets and regulatory pathways. In vivo, PF was induced in adult male Wistar rats by Mtx, followed by oral CSE administration (50-150 mg/kg). Biochemical markers of inflammation, oxidative stress, extracellular matrix deposition, EMT, and ncRNA expression (<i>ncNRFR</i> and <i>let-7d</i>) were quantified alongside histopathology and immunohistochemistry. <b>Results</b>: CSE contained diverse terpenes, phenolics, flavonoids, glucosinolates, and amino acid derivatives. It exhibited potent antioxidant activity and antiproliferative effects against A549 and Hep2 lung cancer cells. Network analysis identified 997 overlapping CSE-PF targets and highlighted IL6 and MMP1 as relevant <i>miR-let-7d</i>-associated nodes. In vivo, Mtx-induced marked fibrosis characterized by increased <i>ncNRFR</i>, reduced <i>let-7d</i>, elevated IL6, HMGB1, TGF-β, MMP1, collagen, and hydroxyproline, and reduced antioxidant enzyme activity. CSE treatment dose-dependently mitigated these alterations, improved histoarchitecture, and reduced collagen deposition. <b>Conclusions</b>: CSE showed antifibrotic, antioxidant, and anti-inflammatory activity in MTX-induced PF in rats and modulated the reciprocal expression patterns of <i>ncNRFR</i> and <i>let-7d</i>. These findings support CSE as a potential source of bioactive constituents for PF management and identify the putative <i>ncNRFR-let-7d</i> regulatory relationship as a novel pathway in fibrotic lung disease, warranting further mechanistic investigation.

PharmaceuticalsVol. 18(12)
Princess Nourah bint Abdulrahman University (SA), Ain Shams University (EG), Suez Canal University (EG), Zagazig University (EG), Umm al-Qura University (SA), Hokkaido University (JP), Imam Mohammad ibn Saud Islamic University (SA), Humboldt-Universität zu Berlin (DE), University of Jeddah (SA), Dibrugarh University (IN), Port Said University (EG)
Princess Nourah Bint Abdulrahman University
Openalex Percentile: Top 55%
Food Science and Nutritional Studies
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