A Review of Deep Learning Approaches Based on Segment Anything Model for Medical Image Segmentation

Medical image segmentation has undergone significant changes in recent years, mainly due to the development of base models. The introduction of the Segment Anything Model (SAM) represents a major shift from task-specific architectures to universal architectures. This review discusses the adaptation of SAM in medical visualisation, focusing on three primary domains. Firstly, multimodal fusion frameworks implement semantic alignment of heterogeneous visual methods. Secondly, volumetric extensions transition from slice-based processing to native 3D spatial reasoning with architectures such as SAM3D, ProtoSAM-3D, and VISTA3D. Thirdly, uncertainty-aware architectures integrate probabilistic calibration for clinical interpretability, as illustrated by the SAM-U and E-Bayes SAM models. A comparative analysis reveals that SAM derivatives with effective parameters achieve Dice coefficients of 81-95%, while concomitantly reducing annotation requirements by 56-73%. Future research directions include incorporating adaptive domain hints, Bayesian self-correction mechanisms, and unified volumetric frameworks to enable autonomous generalisation across diverse medical imaging contexts.

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Publication Details

Journal
Bioengineering
Published
2025-11-29
DOI
https://doi.org/10.3390/bioengineering12121312
Primary Topic
Advanced Neural Network Applications
Type
article
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A Review of Deep Learning Approaches Based on Segment Anything Model for Medical Image Segmentation

Assel Mukasheva, Jeong Won Kang, Dina Koishiyeva, Dinargul Mukhammejanova
Bioengineering
Advanced Neural Network Applications
article

A Review of Deep Learning Approaches Based on Segment Anything Model for Medical Image Segmentation

Assel Mukasheva, Jeong Won Kang, Dina Koishiyeva, Dinargul Mukhammejanova
article en

Abstract

Medical image segmentation has undergone significant changes in recent years, mainly due to the development of base models. The introduction of the Segment Anything Model (SAM) represents a major shift from task-specific architectures to universal architectures. This review discusses the adaptation of SAM in medical visualisation, focusing on three primary domains. Firstly, multimodal fusion frameworks implement semantic alignment of heterogeneous visual methods. Secondly, volumetric extensions transition from slice-based processing to native 3D spatial reasoning with architectures such as SAM3D, ProtoSAM-3D, and VISTA3D. Thirdly, uncertainty-aware architectures integrate probabilistic calibration for clinical interpretability, as illustrated by the SAM-U and E-Bayes SAM models. A comparative analysis reveals that SAM derivatives with effective parameters achieve Dice coefficients of 81-95%, while concomitantly reducing annotation requirements by 56-73%. Future research directions include incorporating adaptive domain hints, Bayesian self-correction mechanisms, and unified volumetric frameworks to enable autonomous generalisation across diverse medical imaging contexts.

BioengineeringVol. 12(12)
Korea National University of Transportation (KR), Kazakh-British Technical University (KZ), Al-Farabi Kazakh National University (KZ)
Openalex Percentile: Top 61%
Advanced Neural Network Applications
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A Review of Deep Learning Approaches Based on Segment Anything Model for Medical Image Segmentation — Assel Mukasheva, Jeong Won Kang, et al. · Bioengineering (2025) | TGRS Research Map | TGRS