Clinical Artificial Intelligence for High-Resolution Single-Cell Analysis: Opportunities and Challenges for Therapeutic Interpretation

Cells are the basic structural and functional unit of life, and the ability to study and explore genotypic and phenotypic characteristics is important to understand the complex biological mechanisms happening within a cell. Cells in different tissues exhibit enormous heterogeneity that gives rise to variations in the function of cells during health and disease. Over the last decade, single-cell analysis has gained huge attention, particularly after the emergence of AI-based algorithms. The 10x Genomics and microfluidic technologies help to analyse transcriptomes on a cell-by-cell basis. Single-cell ChIP- sequncing technologies play a very important role in mapping cellular diversity, histone modifications, and protein-DNA interactions. In this short communication, we have discussed the advanced single-cell multi-omics methods, AI-driven technologies, and their applications. We have highlighted how single-cell analysis, such as NGS and other computational methods, can change the landscape of healthcare and its impact on the fundamental translational research for personalized medicine. This article also discusses the existing challenges, such as regulatory aspects and issues related to data privacy, safety, and possible biases.

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Publication Details

Journal
International Journal of Clinical Medical Research
Published
2025-11-20
DOI
https://doi.org/10.61466/ijcmr3060003
Primary Topic
Single-cell and spatial transcriptomics
Type
article
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article

Clinical Artificial Intelligence for High-Resolution Single-Cell Analysis: Opportunities and Challenges for Therapeutic Interpretation

Nelli Giribabu, Azarae Hj Idris, Sithu Aung, Humaira Shah
International Journal of Clinical Medical Research
Single-cell and spatial transcriptomics
article

Clinical Artificial Intelligence for High-Resolution Single-Cell Analysis: Opportunities and Challenges for Therapeutic Interpretation

Nelli Giribabu, Azarae Hj Idris, Sithu Aung, Humaira Shah
article en

Abstract

Cells are the basic structural and functional unit of life, and the ability to study and explore genotypic and phenotypic characteristics is important to understand the complex biological mechanisms happening within a cell. Cells in different tissues exhibit enormous heterogeneity that gives rise to variations in the function of cells during health and disease. Over the last decade, single-cell analysis has gained huge attention, particularly after the emergence of AI-based algorithms. The 10x Genomics and microfluidic technologies help to analyse transcriptomes on a cell-by-cell basis. Single-cell ChIP- sequncing technologies play a very important role in mapping cellular diversity, histone modifications, and protein-DNA interactions. In this short communication, we have discussed the advanced single-cell multi-omics methods, AI-driven technologies, and their applications. We have highlighted how single-cell analysis, such as NGS and other computational methods, can change the landscape of healthcare and its impact on the fundamental translational research for personalized medicine. This article also discusses the existing challenges, such as regulatory aspects and issues related to data privacy, safety, and possible biases.

International Journal of Clinical Medical ResearchVol. 3(6)
University of Malaya (MY)
Openalex Percentile: Top 66%
Single-cell and spatial transcriptomics
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Clinical Artificial Intelligence for High-Resolution Single-Cell Analysis: Opportunities and Challenges for Therapeutic Interpretation — Nelli Giribabu, Azarae Hj Idris, et al. · International Journal of Clinical Medical Research (2025) | TGRS Research Map | TGRS