Bulk RNA-seq deconvolution heterogeneity across paired pancreatic cancer human samples

Together, the findings suggest that more than one tumor sample may be needed for effective treatment planning. Any potential difference in observed expression values across the paired samples could be related to the different cell type proportions across the samples. The sample size was small, and each study used different sequencing technologies, so any interpretation should be confirmed with additional studies.

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Publication Details

Journal
Frontiers in Genetics
Published
2025-11-30
DOI
https://doi.org/10.3389/fgene.2025.1662924
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
0.00
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article

Bulk RNA-seq deconvolution heterogeneity across paired pancreatic cancer human samples

Hugues Sicotte, Samuel O. Antwi, Rick J. Jansen, Kari G. Rabe et al.
Frontiers in Genetics
Single-cell and spatial transcriptomics
article

Bulk RNA-seq deconvolution heterogeneity across paired pancreatic cancer human samples

Hugues Sicotte, Samuel O. Antwi, Rick J. Jansen, Kari G. Rabe, Sarah A. Munro
article en

Abstract

Together, the findings suggest that more than one tumor sample may be needed for effective treatment planning. Any potential difference in observed expression values across the paired samples could be related to the different cell type proportions across the samples. The sample size was small, and each study used different sequencing technologies, so any interpretation should be confirmed with additional studies.

Frontiers in GeneticsVol. 16
University of Minnesota (US), Jacksonville College (US), University of Minnesota Medical Center (US), Mayo Clinic in Florida (US)
Openalex Percentile: Top 66%
Single-cell and spatial transcriptomics
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