Anatomy-to-tract mapping infers white matter pathways without diffusion streamline propagation

Diffusion tractography, a cornerstone of white matter mapping, relies on point-to-point streamline propagation, a process often limited by the signal-to-noise ratio and spatioangular resolution of diffusion MRI (dMRI). Here, we present Anatomy-to-Tract Mapping (ATM), a framework that generates bundle-specific streamlines directly from T1-weighted MRI without requiring orientation field estimation, voxelwise segmentation, or streamline propagation. ATM leverages the high quality and minimal distortion of anatomical MRI and learns from paired T1w and tractogram data to synthesize anatomically plausible, subject-specific streamlines. This anatomy-driven approach addresses complex configurations such as crossing, kissing, and bending fibers, providing robust bundle reconstructions. Using the TractoInferno dataset with 30 white matter bundles, we evaluate ATM against diffusion-based methods, including MRtrix probabilistic tracking with BundleSeg and SCIL atlas warping. ATM demonstrates strong performance across multiple metrics, including bundle similarity, volume coverage, angular correlation, and geometric fidelity.

Authors

Institutions

Publication Details

Journal
Nature Communications
Published
2025-11-29
DOI
https://doi.org/10.1038/s41467-025-66615-w
Primary Topic
Advanced Neuroimaging Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Anatomy-to-tract mapping infers white matter pathways without diffusion streamline propagation

Pew‐Thian Yap, Yee Fan Tan, Khoi Minh Huynh, Chee‐Ming Ting et al.
Nature Communications
Advanced Neuroimaging Techniques and Applications
article

Anatomy-to-tract mapping infers white matter pathways without diffusion streamline propagation

Pew‐Thian Yap, Yee Fan Tan, Khoi Minh Huynh, Chee‐Ming Ting, Raphaël C.‐W. Phan, Siyuan Liu
article en

Abstract

Diffusion tractography, a cornerstone of white matter mapping, relies on point-to-point streamline propagation, a process often limited by the signal-to-noise ratio and spatioangular resolution of diffusion MRI (dMRI). Here, we present Anatomy-to-Tract Mapping (ATM), a framework that generates bundle-specific streamlines directly from T1-weighted MRI without requiring orientation field estimation, voxelwise segmentation, or streamline propagation. ATM leverages the high quality and minimal distortion of anatomical MRI and learns from paired T1w and tractogram data to synthesize anatomically plausible, subject-specific streamlines. This anatomy-driven approach addresses complex configurations such as crossing, kissing, and bending fibers, providing robust bundle reconstructions. Using the TractoInferno dataset with 30 white matter bundles, we evaluate ATM against diffusion-based methods, including MRtrix probabilistic tracking with BundleSeg and SCIL atlas warping. ATM demonstrates strong performance across multiple metrics, including bundle similarity, volume coverage, angular correlation, and geometric fidelity.

Nature CommunicationsVol. 17(1)
University of North Carolina at Chapel Hill (US), Monash University Malaysia (MY), University of North Carolina Health Care (US), Imaging Center (US), Dalian Maritime University (CN)
Openalex Percentile: Top 48%
Advanced Neuroimaging Techniques and Applications
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Anatomy-to-tract mapping infers white matter pathways without diffusion streamline propagation — Pew‐Thian Yap, Yee Fan Tan, et al. · Nature Communications (2025) | TGRS Research Map | TGRS