Single‐Nucleus <scp>RNA</scp> ‐Seq Reveals Aerobic Exercise‐Induced Remodeling of Spinal Cord Aging in Mice

Spinal cord aging is a critical physiological process that compromises central nervous system (CNS) homeostasis and plasticity. Exercise, as a systemic intervention with broad health benefits, has been shown to delay neurodegeneration and preserve tissue function; however, its impact on dynamic cellular lineage evolution and intercellular communication within the aging spinal cord remains poorly characterized. In this study, we employed single-nucleus RNA sequencing (snRNA-seq) to construct a high-resolution cellular atlas of the mouse spinal cord under young, aged, and aerobic exercise-intervened conditions. By integrating unsupervised clustering, cell proportion analysis, pseudotime trajectory reconstruction, gene regulatory network (GRN) inference, and intercellular communication mapping, we systematically characterized transcriptional and cellular alterations associated with aging and their modulation through exercise. Aging induced pronounced shifts in cell-type composition and subpopulation structures, which were partially reversed by exercise intervention. Pseudotime analyses of oligodendrocytes, astrocytes, and microglia revealed that exercise remodeled their differentiation trajectories and restored functional states associated with myelin formation, metabolic homeostasis, and inflammation control. GRN analysis identified several key regulators whose centrality and expression were disrupted during aging but reestablished after exercise, suggesting a recovery of transcriptional network organization. Furthermore, intercellular communication analysis revealed reduced signaling strength and connectivity during aging, particularly within gap junction pathways, which were partially restored by exercise, indicating improved cellular coordination. Together, these findings provide a comprehensive single-cell landscape of the aging spinal cord and demonstrate that exercise reprograms cellular lineages and regulatory networks, offering mechanistic insights into how it mitigates CNS aging and preserves neural function.

Authors

Institutions

Publication Details

Journal
The FASEB Journal
Published
2025-11-27
DOI
https://doi.org/10.1096/fj.202503256r
Citations
3
Primary Topic
Single-cell and spatial transcriptomics
Type
article
Field-Weighted Citation Impact
2.42

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Single‐Nucleus RNA ‐Seq Reveals Aerobic Exercise‐Induced Remodeling of Spinal Cord Aging in Mice

Jiawei Du, Xuesong Zhang, Ning Du, Jinghua Hou
3 citations
The FASEB Journal
Single-cell and spatial transcriptomics
2.42
article

Single‐Nucleus RNA ‐Seq Reveals Aerobic Exercise‐Induced Remodeling of Spinal Cord Aging in Mice

Jiawei Du, Xuesong Zhang, Ning Du, Jinghua Hou
article en
3 citations

Abstract

Spinal cord aging is a critical physiological process that compromises central nervous system (CNS) homeostasis and plasticity. Exercise, as a systemic intervention with broad health benefits, has been shown to delay neurodegeneration and preserve tissue function; however, its impact on dynamic cellular lineage evolution and intercellular communication within the aging spinal cord remains poorly characterized. In this study, we employed single-nucleus RNA sequencing (snRNA-seq) to construct a high-resolution cellular atlas of the mouse spinal cord under young, aged, and aerobic exercise-intervened conditions. By integrating unsupervised clustering, cell proportion analysis, pseudotime trajectory reconstruction, gene regulatory network (GRN) inference, and intercellular communication mapping, we systematically characterized transcriptional and cellular alterations associated with aging and their modulation through exercise. Aging induced pronounced shifts in cell-type composition and subpopulation structures, which were partially reversed by exercise intervention. Pseudotime analyses of oligodendrocytes, astrocytes, and microglia revealed that exercise remodeled their differentiation trajectories and restored functional states associated with myelin formation, metabolic homeostasis, and inflammation control. GRN analysis identified several key regulators whose centrality and expression were disrupted during aging but reestablished after exercise, suggesting a recovery of transcriptional network organization. Furthermore, intercellular communication analysis revealed reduced signaling strength and connectivity during aging, particularly within gap junction pathways, which were partially restored by exercise, indicating improved cellular coordination. Together, these findings provide a comprehensive single-cell landscape of the aging spinal cord and demonstrate that exercise reprograms cellular lineages and regulatory networks, offering mechanistic insights into how it mitigates CNS aging and preserves neural function.

The FASEB JournalVol. 39(23)
Chinese PLA General Hospital (CN), Beijing Sport University (CN)
National Natural Science Foundation of China
Openalex Percentile: Top 10%
Single-cell and spatial transcriptomics
2.42
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.