Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges

Two Gram-stain-negative, facultatively anaerobic, non-motile and rod-shaped bacterial strains, designated 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup>, were isolated from marine sponges collected in the Republic of Korea. Both strains exhibited catalase and oxidase activities but tested negative for nitrate reduction and indole production. Strain 2201CG32-9<sup>T</sup> showed optimal growth at 30 °C and pH 7.0-8.0 in the presence of 3% (w/v) NaCl, whereas strain 2304DJ12-6<sup>T</sup> grew optimally at 25 °C, pH 8.0 and 3% (w/v) NaCl. Phylogenetic analysis of the 16S rRNA gene and phylogenomic analysis of genome sequences indicated that strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> represented novel species within the genus <i>Microbulbifer</i>. Based on whole-genome phylogenomic analysis, the two strains were most closely related to <i>Microbulbifer okhotskensis</i> OS29<sup>T</sup> and <i>Microbulbifer variabilis</i> ATCC 700307<sup>T</sup>, respectively. The average nucleotide identity values of these strains were found to be <75.9%, and their digital DNA-DNA hybridization values were <22.5%. The DNA G+C contents of strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> were 56.5 and 53.5 mol%, respectively. In both strains, ubiquinone-8 was identified as the predominant respiratory quinone, and the major cellular fatty acids (>5.0%) were C<sub>16:0</sub>, iso-C<sub>11:0</sub> 3-OH, iso-C<sub>15:0</sub>, iso-C<sub>17:0</sub>, summed feature 8 and summed feature 9. As for polar lipids, both strains comprised phosphatidylglycerol, phosphatidylethanolamine and phosphoglycolipid as common major polar lipids. Strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> are classified as two novel species of the genus <i>Microbulbifer</i> based on a polyphasic taxonomic approach, for which the names <i>Microbulbifer discodermiae</i> sp. nov. (2201CG32-9<sup>T</sup>=KACC 23829<sup>T</sup>=JCM 37223<sup>T</sup>) and <i>Microbulbifer jejuensis</i> sp. nov. (2304DJ12-6<sup>T</sup>=KACC 23832<sup>T</sup>=MCCC 1K09533<sup>T</sup>) are proposed, respectively.

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-11-27
DOI
https://doi.org/10.1099/ijsem.0.006980
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges

Jin‐Sook Park, Yil-Sung Moon
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Microbulbifer discodermiae sp. nov. and Microbulbifer jejuensis sp. nov., isolated from marine sponges

Jin‐Sook Park, Yil-Sung Moon
article en

Abstract

Two Gram-stain-negative, facultatively anaerobic, non-motile and rod-shaped bacterial strains, designated 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup>, were isolated from marine sponges collected in the Republic of Korea. Both strains exhibited catalase and oxidase activities but tested negative for nitrate reduction and indole production. Strain 2201CG32-9<sup>T</sup> showed optimal growth at 30 °C and pH 7.0-8.0 in the presence of 3% (w/v) NaCl, whereas strain 2304DJ12-6<sup>T</sup> grew optimally at 25 °C, pH 8.0 and 3% (w/v) NaCl. Phylogenetic analysis of the 16S rRNA gene and phylogenomic analysis of genome sequences indicated that strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> represented novel species within the genus <i>Microbulbifer</i>. Based on whole-genome phylogenomic analysis, the two strains were most closely related to <i>Microbulbifer okhotskensis</i> OS29<sup>T</sup> and <i>Microbulbifer variabilis</i> ATCC 700307<sup>T</sup>, respectively. The average nucleotide identity values of these strains were found to be <75.9%, and their digital DNA-DNA hybridization values were <22.5%. The DNA G+C contents of strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> were 56.5 and 53.5 mol%, respectively. In both strains, ubiquinone-8 was identified as the predominant respiratory quinone, and the major cellular fatty acids (>5.0%) were C<sub>16:0</sub>, iso-C<sub>11:0</sub> 3-OH, iso-C<sub>15:0</sub>, iso-C<sub>17:0</sub>, summed feature 8 and summed feature 9. As for polar lipids, both strains comprised phosphatidylglycerol, phosphatidylethanolamine and phosphoglycolipid as common major polar lipids. Strains 2201CG32-9<sup>T</sup> and 2304DJ12-6<sup>T</sup> are classified as two novel species of the genus <i>Microbulbifer</i> based on a polyphasic taxonomic approach, for which the names <i>Microbulbifer discodermiae</i> sp. nov. (2201CG32-9<sup>T</sup>=KACC 23829<sup>T</sup>=JCM 37223<sup>T</sup>) and <i>Microbulbifer jejuensis</i> sp. nov. (2304DJ12-6<sup>T</sup>=KACC 23832<sup>T</sup>=MCCC 1K09533<sup>T</sup>) are proposed, respectively.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(11)
Hannam University (KR)
Openalex Percentile: Top 67%
Genomics and Phylogenetic Studies
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