A practical prescription for magnetic resonance microscopy in a horizontal bore magnet

Magnetic resonance microscopy (MRM) produces high spatial resolution proton images of biological tissues, plants, and porous media, revealing microstructural details and contrast unattainable by other means. A major challenge in MRM is the low signal-to-noise ratio at high spatial resolutions, as smaller voxels produce smaller MR signals. This necessitates the use of highly sensitive microcoils, high-performance gradient systems, and high magnetic fields. Here, we present a step-by-step prescription for fabricating a cost-effective, flexible microimaging probe system compatible with horizontal bore high-field MRI systems. We demonstrate performance at 15.2 T by acquiring high-resolution (15 μm isotropic voxels) images of ex vivo mouse spinal cord (gray matter SNR 38; 46 h scan) and hippocampus (SNR 67; 45 h scan), clearly resolving microstructural features. Shorter imaging times are possible using compressed sampling. The flexible probe design supports solenoid diameters ranging from < 1 mm up to 10 mm in diameter, offering flexibility for imaging a variety of biological samples at high resolution.

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Publication Details

Journal
npj Imaging
Published
2025-11-26
DOI
https://doi.org/10.1038/s44303-025-00129-4
Primary Topic
Advanced MRI Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

A practical prescription for magnetic resonance microscopy in a horizontal bore magnet

John C. Gore, Bibek Dhakal, Junzhong Xu, Adam W. Anderson et al.
npj Imaging
Advanced MRI Techniques and Applications
article

A practical prescription for magnetic resonance microscopy in a horizontal bore magnet

John C. Gore, Bibek Dhakal, Junzhong Xu, Adam W. Anderson, Mark D. Does, Benjamin M. Hardy
article en

Abstract

Magnetic resonance microscopy (MRM) produces high spatial resolution proton images of biological tissues, plants, and porous media, revealing microstructural details and contrast unattainable by other means. A major challenge in MRM is the low signal-to-noise ratio at high spatial resolutions, as smaller voxels produce smaller MR signals. This necessitates the use of highly sensitive microcoils, high-performance gradient systems, and high magnetic fields. Here, we present a step-by-step prescription for fabricating a cost-effective, flexible microimaging probe system compatible with horizontal bore high-field MRI systems. We demonstrate performance at 15.2 T by acquiring high-resolution (15 μm isotropic voxels) images of ex vivo mouse spinal cord (gray matter SNR 38; 46 h scan) and hippocampus (SNR 67; 45 h scan), clearly resolving microstructural features. Shorter imaging times are possible using compressed sampling. The flexible probe design supports solenoid diameters ranging from < 1 mm up to 10 mm in diameter, offering flexibility for imaging a variety of biological samples at high resolution.

npj ImagingVol. 3(1)
Vanderbilt University (US), Remcom (United States) (US), Vanderbilt University Medical Center (US)
Openalex Percentile: Top 48%
Advanced MRI Techniques and Applications
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A practical prescription for magnetic resonance microscopy in a horizontal bore magnet — John C. Gore, Bibek Dhakal, et al. · npj Imaging (2025) | TGRS Research Map | TGRS