Machine learning-based identification of cuproptosis-related signatures and immune microenvironment in idiopathic pulmonary fibrosis

Idiopathic pulmonary fibrosis (IPF) is a fatal fibrotic lung disease. This study aimed to explore cuproptosis-related molecular clusters and build a predictive model for IPF. Using dataset GSE32537, we analyzed immune infiltration and cuproptosis regulators, followed by WGCNA and machine-learning modeling. Two cuproptosis-related clusters were identified, with C2 showing stronger immune activation. Among four algorithms, the GLM model showed the best performance (AUC = 0.992) and yielded a five-gene signature. The nomogram and calibration analyses confirmed its accuracy. This study provides a reliable IPF prediction model and insight into cuproptosis-related mechanisms.

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Publication Details

Journal
Computer Methods in Biomechanics & Biomedical Engineering
Published
2025-11-26
DOI
https://doi.org/10.1080/10255842.2025.2584393
Primary Topic
Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
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article
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article

Machine learning-based identification of cuproptosis-related signatures and immune microenvironment in idiopathic pulmonary fibrosis

Qi Zhao, Xiaoqin Liu, Chuyan Wu, Zhenzhen Wu et al.
Computer Methods in Biomechanics & Biomedical Engineering
Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
article

Machine learning-based identification of cuproptosis-related signatures and immune microenvironment in idiopathic pulmonary fibrosis

Qi Zhao, Xiaoqin Liu, Chuyan Wu, Zhenzhen Wu, Feng Jiang, Xiaoyan Xie
article en

Abstract

Idiopathic pulmonary fibrosis (IPF) is a fatal fibrotic lung disease. This study aimed to explore cuproptosis-related molecular clusters and build a predictive model for IPF. Using dataset GSE32537, we analyzed immune infiltration and cuproptosis regulators, followed by WGCNA and machine-learning modeling. Two cuproptosis-related clusters were identified, with C2 showing stronger immune activation. Among four algorithms, the GLM model showed the best performance (AUC = 0.992) and yielded a five-gene signature. The nomogram and calibration analyses confirmed its accuracy. This study provides a reliable IPF prediction model and insight into cuproptosis-related mechanisms.

Computer Methods in Biomechanics & Biomedical Engineering
University of Science and Technology of China (CN), Nanjing Drum Tower Hospital (CN), Obstetrics and Gynecology Hospital of Fudan University (CN), Jiangsu Province Hospital (CN), Nanjing Medical University (CN)
Openalex Percentile: Top 45%
Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis
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