Design and Development of Sulfonamide-Chalcones as Antiepileptic Candidates: Computational and Zebrafish-Based Validation Approaches

The study aims to develop safer and more effective antiepileptic drugs (AEDs) by targeting the γ-aminobutyric acid type A (GABA<sub>A</sub>) receptor, an important inhibitory neurotransmitter system involved in the control of neuronal excitability and seizures. With epilepsy rates rising worldwide and current AEDs often causing serious side effects, new neurotherapeutics with better efficacy and safety are urgently needed. In this context, sulfonamides, known for their proven anticonvulsant properties, were selected as the core scaffold for the development of new sulfonamide-chalcone hybrids (compounds <b>1</b>-<b>36</b>) as potential AED candidates. These compounds were analyzed for their drug-likeness, ADMET profiles, and electronic properties using density functional theory (DFT) calculations. Molecular docking studies were then performed to examine their binding affinity to the GABA<sub>A</sub> receptor, revealing that the 4-(trifluoromethyl)-sulfonamide-chalcones (<b>19</b>, <b>20</b>, and <b>21</b>) had the highest binding affinity (-10.3 to -10.1 kcal/mol) compared to the standard AED, valproic acid (VPA; -5.4 kcal/mol). To further support these findings, molecular dynamics (MD) simulations were performed with the top candidates. Analyses of root-mean-square deviation (RMSD), hydrogen bonding (H-bonds), radius of gyration (<i>R</i> <sub>g</sub>), and solvent-accessible surface area (SASA) indicated that compound <b>20</b> exhibited the greatest stability throughout the simulation. Subsequently, to address toxicity risks, in vivo zebrafish mortality assays were performed to determine the LC<sub>50</sub> values before proceeding to behavioral testing. All compounds showed a favorable safety profile and antiepileptic potential, as validated using a pentylenetetrazole (PTZ)-induced seizure zebrafish model. In conclusion, this integrated computational-experimental approach highlights the therapeutic potential of sulfonamide-chalcone hybrids, particularly 4-(trifluoromethyl)-<i>N</i>-(4-(3-(4-(trifluoromethyl)-phenyl)-acryloyl)-phenyl)-benzenesulfonamide (compound <b>20</b>), as potential positive allosteric modulators of the GABA<sub>A</sub> receptor, offering a viable pathway for the development of next-generation AEDs with improved efficacy and safety profiles.

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Journal
ACS Omega
Published
2025-11-13
DOI
https://doi.org/10.1021/acsomega.5c04809
Primary Topic
Zebrafish Biomedical Research Applications
Type
article
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article

Design and Development of Sulfonamide-Chalcones as Antiepileptic Candidates: Computational and Zebrafish-Based Validation Approaches

Siti Munirah Mohd Faudzi, Muhammad Syafiq Akmal Mohd Fahmi, Anis Nasuha Adzahar, Ahmad Zaidi Ismail et al.
ACS Omega
Zebrafish Biomedical Research Applications
article

Design and Development of Sulfonamide-Chalcones as Antiepileptic Candidates: Computational and Zebrafish-Based Validation Approaches

Siti Munirah Mohd Faudzi, Muhammad Syafiq Akmal Mohd Fahmi, Anis Nasuha Adzahar, Ahmad Zaidi Ismail, Muhammad Alif Mohammad Latif, Nik Nur Farhana Nik Aizan
article en

Abstract

The study aims to develop safer and more effective antiepileptic drugs (AEDs) by targeting the γ-aminobutyric acid type A (GABA<sub>A</sub>) receptor, an important inhibitory neurotransmitter system involved in the control of neuronal excitability and seizures. With epilepsy rates rising worldwide and current AEDs often causing serious side effects, new neurotherapeutics with better efficacy and safety are urgently needed. In this context, sulfonamides, known for their proven anticonvulsant properties, were selected as the core scaffold for the development of new sulfonamide-chalcone hybrids (compounds <b>1</b>-<b>36</b>) as potential AED candidates. These compounds were analyzed for their drug-likeness, ADMET profiles, and electronic properties using density functional theory (DFT) calculations. Molecular docking studies were then performed to examine their binding affinity to the GABA<sub>A</sub> receptor, revealing that the 4-(trifluoromethyl)-sulfonamide-chalcones (<b>19</b>, <b>20</b>, and <b>21</b>) had the highest binding affinity (-10.3 to -10.1 kcal/mol) compared to the standard AED, valproic acid (VPA; -5.4 kcal/mol). To further support these findings, molecular dynamics (MD) simulations were performed with the top candidates. Analyses of root-mean-square deviation (RMSD), hydrogen bonding (H-bonds), radius of gyration (<i>R</i> <sub>g</sub>), and solvent-accessible surface area (SASA) indicated that compound <b>20</b> exhibited the greatest stability throughout the simulation. Subsequently, to address toxicity risks, in vivo zebrafish mortality assays were performed to determine the LC<sub>50</sub> values before proceeding to behavioral testing. All compounds showed a favorable safety profile and antiepileptic potential, as validated using a pentylenetetrazole (PTZ)-induced seizure zebrafish model. In conclusion, this integrated computational-experimental approach highlights the therapeutic potential of sulfonamide-chalcone hybrids, particularly 4-(trifluoromethyl)-<i>N</i>-(4-(3-(4-(trifluoromethyl)-phenyl)-acryloyl)-phenyl)-benzenesulfonamide (compound <b>20</b>), as potential positive allosteric modulators of the GABA<sub>A</sub> receptor, offering a viable pathway for the development of next-generation AEDs with improved efficacy and safety profiles.

ACS OmegaVol. 10(46)
Universiti Putra Malaysia (MY), Bioscience Research (US), HUN-REN Centre for Agricultural Research (HU)
Openalex Percentile: Top 62%
Zebrafish Biomedical Research Applications
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