Cryo-CLXEM introduces cryo-SXT to bridge the resolution gap in cryo-CLEM

Cryo-imaging in cellular biology provides the means to visualize the cellular interior at close-to-native conditions. A cornerstone in the field has been cryo-correlative light and electron microscopy (cryo-CLEM), with cryo-visible light fluorescent microscopy (cryo-VLFM) providing the specificity by tagging macromolecules or structures and cryo-electron tomography (cryo-ET) for the structural details at molecular level. The large resolution gap between these techniques, however, is limiting this correlative workflow as cryo-ET targets are often smaller than the resolution limit of cryo-VLFM. Here we introduce cryo-soft X-ray tomography (cryo-SXT) as an intermediate step that can compensate for the partial view caused by the lost cellular material due to FIB-milling and limited resolution of cryo-VLFM by providing invaluable cellular context information in 3D to the cryo-ET dataset within an integrated workflow. This work shows that X-ray and electron imaging are not mutually exclusive, creating opportunities for further correlative imaging strategies.

Authors

Institutions

Publication Details

Journal
Communications Biology
Published
2025-11-25
DOI
https://doi.org/10.1038/s42003-025-09072-x
Citations
1
Primary Topic
Advanced Electron Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
2.55

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Cryo-CLXEM introduces cryo-SXT to bridge the resolution gap in cryo-CLEM

Anna Sartori-Rupp, Anastasia D. Gazi, Jost Enninga, J. Groen et al.
1 citations
Communications Biology
Advanced Electron Microscopy Techniques and Applications
2.55
article

Cryo-CLXEM introduces cryo-SXT to bridge the resolution gap in cryo-CLEM

Anna Sartori-Rupp, Anastasia D. Gazi, Jost Enninga, J. Groen, Matthijn Vos, Anne Brelot, Eva Pereiro, Sergey Kapishnikov
article en
1 citations

Abstract

Cryo-imaging in cellular biology provides the means to visualize the cellular interior at close-to-native conditions. A cornerstone in the field has been cryo-correlative light and electron microscopy (cryo-CLEM), with cryo-visible light fluorescent microscopy (cryo-VLFM) providing the specificity by tagging macromolecules or structures and cryo-electron tomography (cryo-ET) for the structural details at molecular level. The large resolution gap between these techniques, however, is limiting this correlative workflow as cryo-ET targets are often smaller than the resolution limit of cryo-VLFM. Here we introduce cryo-soft X-ray tomography (cryo-SXT) as an intermediate step that can compensate for the partial view caused by the lost cellular material due to FIB-milling and limited resolution of cryo-VLFM by providing invaluable cellular context information in 3D to the cryo-ET dataset within an integrated workflow. This work shows that X-ray and electron imaging are not mutually exclusive, creating opportunities for further correlative imaging strategies.

Communications BiologyVol. 8(1)
Centre National de la Recherche Scientifique (FR), Institut Pasteur (FR), Université Paris Cité (FR), Synchrotron soleil (FR), ALBA Synchrotron (Spain) (ES), Data Fusion International (Ireland) (IE)
Equipex, Agence Nationale de la Recherche
Openalex Percentile: Top 8%
Advanced Electron Microscopy Techniques and Applications
2.55
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.