A QM-AI Approach for the Acceleration of Accurate Assessments of Halogen-π Interactions by Training Neural Networks

Noncovalent interactions, such as halogen bonds (XB), play a crucial role in molecular recognition and drug design, yet halogen···π contacts remain comparatively underexplored. Here, we report a proof-of-concept QM-AI approach that integrates high-level quantum mechanical (QM) calculations with neural networks (NNs) to predict halogen···π interaction energies. Nearly 1.4 million MP2/TZVPP single-point calculations on halobenzene-benzene complexes were carried out to generate exhaustive training data, which were represented by simple geometric descriptors as input features for machine learning. The resulting neural network model is specifically designed to capture σ-hole-driven halogen···π interactions under well-defined geometric constraints. The resulting model reproduced reference interaction energies with excellent accuracy (<i>R</i><sup>2</sup> = 0.998, RMSE = 0.16 kJ/mol) and maintained strong performance on independent, randomly generated and PDB-derived test sets. Previously, we have demonstrated in a benchmarking study that "gold standard" CCSD(T) energies of this interaction can be appropriately represented by MP2/TZVPP calculations, but at a better calculation efficiency by 2 orders of magnitude (∼10<sup>2</sup>). Consequently, we herein exploit a methodological "extension" from CCSD(T) → MP2 → NNs. Our approach maintains accuracy close to CCSD(T) benchmarks while achieving a runtime acceleration of up to 8 orders of magnitude (∼10<sup>8</sup>) compared to MP2 calculations. This study demonstrates the feasibility of fast, accurate neural network models based on QM data for halogen···π interactions in a QM-AI approach.

Authors

Institutions

Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-11-25
DOI
https://doi.org/10.1021/acs.jcim.5c02136
Citations
3
Primary Topic
Crystallography and molecular interactions
Type
article
Field-Weighted Citation Impact
5.26
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A QM-AI Approach for the Acceleration of Accurate Assessments of Halogen-π Interactions by Training Neural Networks

Frank M. Boeckler, Markus O. Zimmermann, M. Engelhardt, Finn Mier
3 citations
Journal of Chemical Information and Modeling
Crystallography and molecular interactions
5.26
article

A QM-AI Approach for the Acceleration of Accurate Assessments of Halogen-π Interactions by Training Neural Networks

Frank M. Boeckler, Markus O. Zimmermann, M. Engelhardt, Finn Mier
article en
3 citations

Abstract

Noncovalent interactions, such as halogen bonds (XB), play a crucial role in molecular recognition and drug design, yet halogen···π contacts remain comparatively underexplored. Here, we report a proof-of-concept QM-AI approach that integrates high-level quantum mechanical (QM) calculations with neural networks (NNs) to predict halogen···π interaction energies. Nearly 1.4 million MP2/TZVPP single-point calculations on halobenzene-benzene complexes were carried out to generate exhaustive training data, which were represented by simple geometric descriptors as input features for machine learning. The resulting neural network model is specifically designed to capture σ-hole-driven halogen···π interactions under well-defined geometric constraints. The resulting model reproduced reference interaction energies with excellent accuracy (<i>R</i><sup>2</sup> = 0.998, RMSE = 0.16 kJ/mol) and maintained strong performance on independent, randomly generated and PDB-derived test sets. Previously, we have demonstrated in a benchmarking study that "gold standard" CCSD(T) energies of this interaction can be appropriately represented by MP2/TZVPP calculations, but at a better calculation efficiency by 2 orders of magnitude (∼10<sup>2</sup>). Consequently, we herein exploit a methodological "extension" from CCSD(T) → MP2 → NNs. Our approach maintains accuracy close to CCSD(T) benchmarks while achieving a runtime acceleration of up to 8 orders of magnitude (∼10<sup>8</sup>) compared to MP2 calculations. This study demonstrates the feasibility of fast, accurate neural network models based on QM data for halogen···π interactions in a QM-AI approach.

Journal of Chemical Information and ModelingVol. 65(24)
University of Tübingen (DE)
Openalex Percentile: Top 4%
Crystallography and molecular interactions
5.26
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.