Domain and Language adaptive pre-training of BERT models for Korean-English bilingual clinical text analysis
To develop bilingual Korean-English medical language models through domain- and language-adaptive pre-training and evaluate their performance in clinical text analysis tasks, specifically semantic similarity and multi-label classification. A bilingual corpus comprising Korean (medical textbooks and online health articles) and English (medical textbooks, health-related articles, and MIMIC-IV EHRs) clinical texts were constructed. Three BERT-based foundation models (Korea Medical [KM-BERT], English Biomedical [BioBERT], and multilingual general domain [M-BERT]) underwent additional pre-training using a newly created bilingual WordPiece vocabulary (45,000 tokens). Model performance was assessed intrinsically on the medical semantic textual similarity (MedSTS) benchmark and extrinsically through multi-label classification of chest computed tomography (CT) reports from tertiary hospitals. Macro F1 scores and Pearson’s correlation coefficients were used as primary evaluation metrics. After bilingual pre-training, the Korean semantic similarity performance of bi-BioBERT improved significantly from a Pearson correlation coefficient ranging 0.190–0.871. In the multi-label classification of chest CT reports, all bilingual models outperformed their respective foundation models; bi-KM-BERT achieved the highest Macro F1 score in both internal (0.9460 vs. 0.8902 for KM-BERT) and external validation (0.9288 vs. 0.8495 for KM-BERT). However, bi-KM-BERT and bi-M-BERT experienced semantic performance declines in Korean tasks, indicating catastrophic forgetting, and gradient-based token-importance heatmaps confirmed that the bilingual models captured critical cross-lingual medical contexts more effectively. The findings underscore that careful bilingual vocabulary curation and targeted domain-adaptive pre-training enhance natural language processing (NLP) performance in multilingual clinical environments, even with modest training resources. Continual-learning strategies should be explored to mitigate minor forgetting effects. Domain- and language-adaptive pre-training of bilingual medical corpora improves NLP model performance in multilingual clinical settings, thereby providing a scalable strategy for enhancing clinical text analysis capabilities in resource-limited bilingual contexts.
Authors
- Yebin Lee (ORCID: https://orcid.org/0000-0001-5047-3568)
- Hyung Joon Joo (ORCID: https://orcid.org/0000-0003-1846-8464)
- Sanghoun Song (ORCID: https://orcid.org/0000-0002-4234-232X)
- Eunbeen Jo (ORCID: https://orcid.org/0000-0002-2468-0114)
- Eunbi Cho (ORCID: https://orcid.org/0009-0005-1704-4063)
Institutions
- Korea University (KR)
- Korea University Medical Center (KR)
- Korea University (JP)
Publication Details
- Journal
- BMC Medical Informatics and Decision Making
- Published
- 2025-11-25
- DOI
- https://doi.org/10.1186/s12911-025-03262-7
- Citations
- 1
- Primary Topic
- Topic Modeling
- Type
- article
- Field-Weighted Citation Impact
- 2.48
Funders
- Korea National Institute of Health