Illuminating the Interface of Blocc Chemistry and Data Science: An Introduction to K-Nearest Neighbor Analysis and K-Medoids Clustering

The discovery of new chemical functions is being accelerated by blocc chemistry for iterative carbon-carbon bond formation coupled to artificial intelligence (AI) and machine learning (ML) techniques; yet, these technologies are largely absent from introductory undergraduate courses. This lab emphasizes the utility of data science tools through the context of discovering chemical function. We propose that teaching blocc chemistry provides student scientists the ability to explore functional data from frontier research generated for the purpose of this labeven with minimal knowledge of organic chemistry. Here, we report the first laboratory experiment in a sequence designed to illuminate the AI-Chemistry interface. This first experiment teaches students the fundamental principles of K-Nearest Neighbor (KNN) analysis and K-Medoids clustering to predict unknown chemical functions through the lens of blocc chemistry.

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Publication Details

Journal
Journal of Chemical Education
Published
2025-11-24
DOI
https://doi.org/10.1021/acs.jchemed.5c00796
Primary Topic
Machine Learning in Materials Science
Type
article
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article

Illuminating the Interface of Blocc Chemistry and Data Science: An Introduction to K-Nearest Neighbor Analysis and K-Medoids Clustering

James Planey, Dylan Brandt, Rachel Switzky, Rachel I. Hammond et al.
Journal of Chemical Education
Machine Learning in Materials Science
article

Illuminating the Interface of Blocc Chemistry and Data Science: An Introduction to K-Nearest Neighbor Analysis and K-Medoids Clustering

James Planey, Dylan Brandt, Rachel Switzky, Rachel I. Hammond, Serenity Desmond, Bhagya Gunasekera, Martin D. Burke, Nicholas H. Angello, Nolan M. Green, Thomas R. Hummel, José M. Martínez, Jamie L. B. Putnam
article en

Abstract

The discovery of new chemical functions is being accelerated by blocc chemistry for iterative carbon-carbon bond formation coupled to artificial intelligence (AI) and machine learning (ML) techniques; yet, these technologies are largely absent from introductory undergraduate courses. This lab emphasizes the utility of data science tools through the context of discovering chemical function. We propose that teaching blocc chemistry provides student scientists the ability to explore functional data from frontier research generated for the purpose of this labeven with minimal knowledge of organic chemistry. Here, we report the first laboratory experiment in a sequence designed to illuminate the AI-Chemistry interface. This first experiment teaches students the fundamental principles of K-Nearest Neighbor (KNN) analysis and K-Medoids clustering to predict unknown chemical functions through the lens of blocc chemistry.

Journal of Chemical EducationVol. 102(12)
University of Illinois Urbana-Champaign (US), University of Illinois System (US), Immersion (United States) (US)
Openalex Percentile: Top 71%
Machine Learning in Materials Science
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Illuminating the Interface of Blocc Chemistry and Data Science: An Introduction to K-Nearest Neighbor Analysis and K-Medoids Clustering — James Planey, Dylan Brandt, et al. · Journal of Chemical Education (2025) | TGRS Research Map | TGRS