Guest Binding Mechanism of Polycyclic Aromatic Hydrocarbons by Au(I) Metallo-Tweezers Revealed by Computation

Revealing the mechanisms of supramolecular host-guest binding holds crucial elements for exploring the full potential of supramolecular structures and can lead to further designs and optimizations. Here, we present a computational study of how polycyclic aromatic hydrocarbons (PAHs) bind to a tweezer-shaped molecular receptor (Au(I) metallo-tweezers) in organic solvents. First, the structure and dynamics of the gold tweezers in solution are characterized with and without the guest molecule bound in the cavity. Second, the guest-binding process is investigated by means of metadynamics simulations. We found that the calculated binding Gibbs energies are in very good agreement with the experimental results, showing the viability of these approaches in the field. Importantly, the study reveals an unanticipated dynamic process that involves spontaneous rotations of the polyaromatic panels of the host, which modulate the size and shape of the cavity until an effective face-to-face arrangement with the planar guest occurs. Once such an interaction occurs, a complete rotation around the carbon-Au bonds finally locates the planar guest molecule in the core of the cavity. This mechanism highlights the variety of dynamic processes that the rich chemical space of supramolecular chemistry can offer.

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Journal
Inorganic Chemistry
Published
2025-11-13
DOI
https://doi.org/10.1021/acs.inorgchem.5c03400
Primary Topic
Supramolecular Chemistry and Complexes
Type
article
Field-Weighted Citation Impact
0.00

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article

Guest Binding Mechanism of Polycyclic Aromatic Hydrocarbons by Au(I) Metallo-Tweezers Revealed by Computation

Eduardo Peris, Gregori Ujaque, Susana Ibáñez, Gantulga Norjmaa et al.
Inorganic Chemistry
Supramolecular Chemistry and Complexes
article

Guest Binding Mechanism of Polycyclic Aromatic Hydrocarbons by Au(I) Metallo-Tweezers Revealed by Computation

Eduardo Peris, Gregori Ujaque, Susana Ibáñez, Gantulga Norjmaa, Jean‐Didier Maréchal
article en

Abstract

Revealing the mechanisms of supramolecular host-guest binding holds crucial elements for exploring the full potential of supramolecular structures and can lead to further designs and optimizations. Here, we present a computational study of how polycyclic aromatic hydrocarbons (PAHs) bind to a tweezer-shaped molecular receptor (Au(I) metallo-tweezers) in organic solvents. First, the structure and dynamics of the gold tweezers in solution are characterized with and without the guest molecule bound in the cavity. Second, the guest-binding process is investigated by means of metadynamics simulations. We found that the calculated binding Gibbs energies are in very good agreement with the experimental results, showing the viability of these approaches in the field. Importantly, the study reveals an unanticipated dynamic process that involves spontaneous rotations of the polyaromatic panels of the host, which modulate the size and shape of the cavity until an effective face-to-face arrangement with the planar guest occurs. Once such an interaction occurs, a complete rotation around the carbon-Au bonds finally locates the planar guest molecule in the core of the cavity. This mechanism highlights the variety of dynamic processes that the rich chemical space of supramolecular chemistry can offer.

Inorganic ChemistryVol. 64(46)
Universitat Jaume I (ES), Universitat Autònoma de Barcelona (ES), Research Centre in Biological Chemistry of Córdoba (AR)
Generalitat Valenciana, Agencia Estatal de Investigación
Openalex Percentile: Top 73%
Supramolecular Chemistry and Complexes
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Guest Binding Mechanism of Polycyclic Aromatic Hydrocarbons by Au(I) Metallo-Tweezers Revealed by Computation — Eduardo Peris, Gregori Ujaque, et al. · Inorganic Chemistry (2025) | TGRS Research Map | TGRS