Functional Analysis and Clinical Data Reclassify the <scp> <i>DICER1</i> </scp> c.4206+ <scp>1G</scp> &gt;C Variant, Leading to Exon 22 Skipping, as Likely Pathogenic

Pathogenic germline variants in DICER1 predispose to pleuropulmonary blastoma, multinodular goitre, embryonal rhabdomyosarcomas of the uterine cervix, ovarian Sertoli-Leydig cell tumour and a broader spectrum of pathologies. Here, we report a 35-year-old female with diagnoses of pineoblastoma, embryonal rhabdomyosarcoma, leiomyosarcoma, two meningiomas, and a germline DICER1 c.4206+1G>C, p.(?) variant. The variant was classified as a variant of unknown significance (VUS) based on the current ACMG/AMP gene-specific DICER1 guidelines. Additional functional analysis showed that the variant clearly abrogates the function of DICER1 and therefore PS3_Supporting evidence is included in the classification. Based on this the variant is reclassified as likely pathogenic. Moreover, our data suggest that the current ACMG/AMP gene-specific DICER1 guidelines should be modified in relation to the level of evidence strength (moderate to strong/very strong) for exon 22 skipping as well as to the use of the functional evidence (PS3) code.

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Publication Details

Journal
Clinical Genetics
Published
2025-11-24
DOI
https://doi.org/10.1111/cge.70110
Primary Topic
Congenital Diaphragmatic Hernia Studies
Type
article
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article

Functional Analysis and Clinical Data Reclassify the DICER1 c.4206+ 1G >C Variant, Leading to Exon 22 Skipping, as Likely Pathogenic

Xavier Bofill‐De Ros, Sebastian Walpole, Thomas van Overeem Hansen, Ulf Birkedal et al.
Clinical Genetics
Congenital Diaphragmatic Hernia Studies
article

Functional Analysis and Clinical Data Reclassify the DICER1 c.4206+ 1G >C Variant, Leading to Exon 22 Skipping, as Likely Pathogenic

Xavier Bofill‐De Ros, Sebastian Walpole, Thomas van Overeem Hansen, Ulf Birkedal, Karin Wadt, Miren Itxaso Santiago‐Vela, Zhenyi Hong
article en

Abstract

Pathogenic germline variants in DICER1 predispose to pleuropulmonary blastoma, multinodular goitre, embryonal rhabdomyosarcomas of the uterine cervix, ovarian Sertoli-Leydig cell tumour and a broader spectrum of pathologies. Here, we report a 35-year-old female with diagnoses of pineoblastoma, embryonal rhabdomyosarcoma, leiomyosarcoma, two meningiomas, and a germline DICER1 c.4206+1G>C, p.(?) variant. The variant was classified as a variant of unknown significance (VUS) based on the current ACMG/AMP gene-specific DICER1 guidelines. Additional functional analysis showed that the variant clearly abrogates the function of DICER1 and therefore PS3_Supporting evidence is included in the classification. Based on this the variant is reclassified as likely pathogenic. Moreover, our data suggest that the current ACMG/AMP gene-specific DICER1 guidelines should be modified in relation to the level of evidence strength (moderate to strong/very strong) for exon 22 skipping as well as to the use of the functional evidence (PS3) code.

Clinical Genetics
University of Copenhagen (DK), The University of Queensland (AU), Aarhus University (DK), Princess Alexandra Hospital (AU), Copenhagen University Hospital (DK)
Openalex Percentile: Top 45%
Congenital Diaphragmatic Hernia Studies
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Functional Analysis and Clinical Data Reclassify the <scp> <i>DICER1</i> </scp> c.4206+ <scp>1G</scp> &gt;C Variant, Leading to Exon 22 Skipping, as Likely Pathogenic — Xavier Bofill‐De Ros, Sebastian Walpole, et al. · Clinical Genetics (2025) | TGRS Research Map | TGRS