Bioinformatics-based study on the regulatory network of lipid metabolism-related genes and mechanisms in coronary heart disease

Coronary heart disease (CHD), is a complex cardiovascular disease driven by atherosclerosis, resulting from a dynamic interplay between dysregulated lipid metabolism and chronic inflammation. This study integrates bioinformatics analysis of GEO datasets with experimental validation to dissect molecular mechanisms underlying CHD pathogenesis. A total of 487 differentially expressed genes (DEGs) were identified (including 295 upregulated and 192 downregulated), with hub genes such as CD36, ALDH2, TNF-α, and IL1B highlighted in lipid handling, oxidative stress, and pro-inflammatory cascades. Weighted gene co-expression network analysis (WGCNA) revealed aberrant activation of lipid metabolism-related modules in CHD patients. KEGG enrichment highlighted their involvement in fatty acid transport, cholesterol homeostasis, NF-κB, and the IL-17 signaling. LASSO regression, applied to the combined datasets, identified SERPINA1, and GLUL as diagnostic biomarkers, with in vitro models supporting their pro-atherogenic roles in oxLDL-induced endothelial injury. Animal experiments further validated these findings: CHD rat models exhibited marked upregulation of SERPINA1, and GLUL in myocardial tissue, paralleled by increased M1 macrophage infiltration. Together, this study delineates the intricate lipid-immune axis in CHD and proposes novel candidate biomarkers and therapeutic targets, underscoring their potential for advancing precision medicine in CHD.

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Publication Details

Journal
Hereditas
Published
2025-11-24
DOI
https://doi.org/10.1186/s41065-025-00603-4
Primary Topic
Atherosclerosis and Cardiovascular Diseases
Type
article
Field-Weighted Citation Impact
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article

Bioinformatics-based study on the regulatory network of lipid metabolism-related genes and mechanisms in coronary heart disease

Xin‐Xia Tian, Haoqing Shao, Xudong Li, Qinfang Zheng et al.
Hereditas
Atherosclerosis and Cardiovascular Diseases
article

Bioinformatics-based study on the regulatory network of lipid metabolism-related genes and mechanisms in coronary heart disease

Xin‐Xia Tian, Haoqing Shao, Xudong Li, Qinfang Zheng, Zaiyu Xiao, Liping Wang
article en

Abstract

Coronary heart disease (CHD), is a complex cardiovascular disease driven by atherosclerosis, resulting from a dynamic interplay between dysregulated lipid metabolism and chronic inflammation. This study integrates bioinformatics analysis of GEO datasets with experimental validation to dissect molecular mechanisms underlying CHD pathogenesis. A total of 487 differentially expressed genes (DEGs) were identified (including 295 upregulated and 192 downregulated), with hub genes such as CD36, ALDH2, TNF-α, and IL1B highlighted in lipid handling, oxidative stress, and pro-inflammatory cascades. Weighted gene co-expression network analysis (WGCNA) revealed aberrant activation of lipid metabolism-related modules in CHD patients. KEGG enrichment highlighted their involvement in fatty acid transport, cholesterol homeostasis, NF-κB, and the IL-17 signaling. LASSO regression, applied to the combined datasets, identified SERPINA1, and GLUL as diagnostic biomarkers, with in vitro models supporting their pro-atherogenic roles in oxLDL-induced endothelial injury. Animal experiments further validated these findings: CHD rat models exhibited marked upregulation of SERPINA1, and GLUL in myocardial tissue, paralleled by increased M1 macrophage infiltration. Together, this study delineates the intricate lipid-immune axis in CHD and proposes novel candidate biomarkers and therapeutic targets, underscoring their potential for advancing precision medicine in CHD.

HereditasVol. 162(1)
Huaihua University (CN), Hunan University of Traditional Chinese Medicine (CN), First Affiliated Hospital of Hunan University of Traditional Chinese Medicine (CN), Hua Medicine (China) (CN), First Affiliated Hospital of University of South China (CN), University of South China (CN)
Openalex Percentile: Top 60%
Atherosclerosis and Cardiovascular Diseases
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