Model-based spatiotemporal synthetic data generation framework and deep-learning reconstruction for real-time MRI oxygen extraction fraction mapping

<i>Objective.</i>Synthetic data has emerged as a highly efficient solution to address the scarcity of training data in deep learning-based quantitative magnetic resonance imaging (qMRI) reconstruction. However, current applications of synthetic data predominantly focus on two-dimensional (2D) spatial reconstruction, with limited capability to leverage the spatiotemporal correlation inherent in real-time dynamic imaging data to further enhance reconstruction quality.<i>Approach.</i>A model-based spatiotemporal synthetic data generation framework tailored for real-time dynamic scenarios in supervised learning-based reconstruction was proposed. This framework is complemented by an ultra-fast multiple overlapping-echo detachment (MOLED) imaging technique, which enables a three-dimensional (3D) spatiotemporal reconstruction method designed to track dynamic changes in the oxygen extraction fraction (OEF). The proposed method imposes constraints that align the predicted parameters with the ground truth while ensuring consistency in their singular-value subspaces.<i>Main results.</i>The accuracy and effectiveness of the proposed method for<i>T<sub>2</sub></i>and<i>T<sub>2</sub></i><sup>*</sup>mapping were validated through numerical brain, water phantom and human brain experiments, demonstrating superior performance compared to both traditional 2D spatial and 3D spatiotemporal reconstruction methods. This framework reliably enabled dynamic OEF tracking during breath-hold and oxygen inhalation cycles, highlighting its robustness and applicability in real-time scenarios.<i>Significance.</i>The model-based spatiotemporal synthetic data generation framework and the spatiotemporal reconstruction method offer an effective and robust solution for real-time qMRI, with potential applications in other similar real-time dynamic quantitative reconstruction tasks. Moreover, the MOLED sequence underscores the potential for precise and dynamic measurement of brain oxygen metabolism, providing valuable insights into cerebral physiology and metabolic changes.

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Publication Details

Journal
Physics in Medicine and Biology
Published
2025-11-24
DOI
https://doi.org/10.1088/1361-6560/ae2380
Primary Topic
Advanced MRI Techniques and Applications
Type
article
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article

Model-based spatiotemporal synthetic data generation framework and deep-learning reconstruction for real-time MRI oxygen extraction fraction mapping

Shuhui Cai, Congbo Cai, Liuhong Zhu, Qinqin Yang et al.
Physics in Medicine and Biology
Advanced MRI Techniques and Applications
article

Model-based spatiotemporal synthetic data generation framework and deep-learning reconstruction for real-time MRI oxygen extraction fraction mapping

Shuhui Cai, Congbo Cai, Liuhong Zhu, Qinqin Yang, Lina Xu, Jiechao Wang, Jianhui Zhong, Jianfeng Bao, Zejun Wu, Zhong Chen, Jianjun Zhou, Jiabei Chen, Nuowei Ge
article en

Abstract

<i>Objective.</i>Synthetic data has emerged as a highly efficient solution to address the scarcity of training data in deep learning-based quantitative magnetic resonance imaging (qMRI) reconstruction. However, current applications of synthetic data predominantly focus on two-dimensional (2D) spatial reconstruction, with limited capability to leverage the spatiotemporal correlation inherent in real-time dynamic imaging data to further enhance reconstruction quality.<i>Approach.</i>A model-based spatiotemporal synthetic data generation framework tailored for real-time dynamic scenarios in supervised learning-based reconstruction was proposed. This framework is complemented by an ultra-fast multiple overlapping-echo detachment (MOLED) imaging technique, which enables a three-dimensional (3D) spatiotemporal reconstruction method designed to track dynamic changes in the oxygen extraction fraction (OEF). The proposed method imposes constraints that align the predicted parameters with the ground truth while ensuring consistency in their singular-value subspaces.<i>Main results.</i>The accuracy and effectiveness of the proposed method for<i>T<sub>2</sub></i>and<i>T<sub>2</sub></i><sup>*</sup>mapping were validated through numerical brain, water phantom and human brain experiments, demonstrating superior performance compared to both traditional 2D spatial and 3D spatiotemporal reconstruction methods. This framework reliably enabled dynamic OEF tracking during breath-hold and oxygen inhalation cycles, highlighting its robustness and applicability in real-time scenarios.<i>Significance.</i>The model-based spatiotemporal synthetic data generation framework and the spatiotemporal reconstruction method offer an effective and robust solution for real-time qMRI, with potential applications in other similar real-time dynamic quantitative reconstruction tasks. Moreover, the MOLED sequence underscores the potential for precise and dynamic measurement of brain oxygen metabolism, providing valuable insights into cerebral physiology and metabolic changes.

Physics in Medicine and BiologyVol. 70(24)
Jiangxi University of Traditional Chinese Medicine (CN), Nanchang University (CN), Jimei University (CN), Xiamen University (CN), Zhongshan Hospital of Xiamen University (CN), First Affiliated Hospital of Zhengzhou University (CN), University of Rochester (US), Xiamen University of Technology (CN)
Openalex Percentile: Top 49%
Advanced MRI Techniques and Applications
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