The molecular-level diagenetic clock of sinking marine organic matter

The marine biological carbon pump is driven by sinking particulate organic matter (POM). Sinking speed and remineralization rate determine flux attenuation in the mesopelagic. Since the fate of all marine organic matter is either complete remineralization or transformation to more stable products, diagenetic modifications impact carbon dioxide sequestration time from the atmosphere. To investigate particle transformation at the molecular level, we characterize the water-extractable organic matter (WEOM) fraction of sinking particles from dominant biogeochemical environments using ultrahigh-resolution mass spectrometry. We find distinct, inverse associations in molecular-level nitrogen content and degree of transformation (i.e., "stability") of organic matter across a productivity gradient from coastal upwelling to oligotrophic conditions. Nitrogen enrichment and low stability were observed at the coastal upwelling site and persisted to depths >400 m. Further, carbon flux is strongly correlated with the relative abundance of stable WEOM ("Island of Stability" molecular formulae) across productivity regimes and depth. This suggests emergent patterns in epi- and mesopelagic diagenesis, highlighting that the molecular composition of sinking organic matter exiting the euphotic zone varies more across regions than as a function of depth. This is attributed to highly variable sinking rates and the microbial diagenetic histories within the euphotic zone. The stability-flux relationship is considered a "diagenetic clock" relative to organic matter formation where the relative abundance of Island of Stability molecular formulae describes the degree of departure from the organic matter molecular-level composition at formation. This ubiquitous trajectory of the diagenetic clock further underpins a global ocean molecular signature of sinking POM.

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Publication Details

Journal
Proceedings of the National Academy of Sciences
Published
2025-11-24
DOI
https://doi.org/10.1073/pnas.2504769122
Primary Topic
Marine and coastal ecosystems
Type
article
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article

The molecular-level diagenetic clock of sinking marine organic matter

Amy D. Holt, Amy M. McKenna, Huan Chen, Heather J. Forrer et al.
Proceedings of the National Academy of Sciences
Marine and coastal ecosystems
article

The molecular-level diagenetic clock of sinking marine organic matter

Amy D. Holt, Amy M. McKenna, Huan Chen, Heather J. Forrer, Robert G. M. Spencer, Sven A. Kranz, Michael R. Stukel
article en

Abstract

The marine biological carbon pump is driven by sinking particulate organic matter (POM). Sinking speed and remineralization rate determine flux attenuation in the mesopelagic. Since the fate of all marine organic matter is either complete remineralization or transformation to more stable products, diagenetic modifications impact carbon dioxide sequestration time from the atmosphere. To investigate particle transformation at the molecular level, we characterize the water-extractable organic matter (WEOM) fraction of sinking particles from dominant biogeochemical environments using ultrahigh-resolution mass spectrometry. We find distinct, inverse associations in molecular-level nitrogen content and degree of transformation (i.e., "stability") of organic matter across a productivity gradient from coastal upwelling to oligotrophic conditions. Nitrogen enrichment and low stability were observed at the coastal upwelling site and persisted to depths >400 m. Further, carbon flux is strongly correlated with the relative abundance of stable WEOM ("Island of Stability" molecular formulae) across productivity regimes and depth. This suggests emergent patterns in epi- and mesopelagic diagenesis, highlighting that the molecular composition of sinking organic matter exiting the euphotic zone varies more across regions than as a function of depth. This is attributed to highly variable sinking rates and the microbial diagenetic histories within the euphotic zone. The stability-flux relationship is considered a "diagenetic clock" relative to organic matter formation where the relative abundance of Island of Stability molecular formulae describes the degree of departure from the organic matter molecular-level composition at formation. This ubiquitous trajectory of the diagenetic clock further underpins a global ocean molecular signature of sinking POM.

Proceedings of the National Academy of SciencesVol. 122(48)
Florida State University (US), Prediction Systems (United States) (US), National High Magnetic Field Laboratory (US), Rice University (US), Colorado State University (US)
Openalex Percentile: Top 64%
Marine and coastal ecosystems
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