Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles

Protein diffusion, critical for cellular metabolism, occurs in the highly crowded cytoplasm. Understanding how this dynamics changes when organisms are adapted to different thermal niches is a fundamental challenge in microbiology and biophysics. In Escherichia coli, protein diffusion undergoes a pronounced slowdown at temperatures near cellular death, coinciding with the early stages of unfolding. To determine whether this phenomenon is universal, we investigated psychrophilic and hyperthermophilic bacteria. In both species, a marked diffusion slowdown takes place at the onset of proteome melting. However, while the dynamic arrest is associated with the thermal death point for the hyperthermophilic proteome, the psychrophilic proteome maintains substantial mobility well beyond the cellular inactivation. The decoupling between metabolic viability and proteome dynamics and stability suggests that the functional processes of psychrophilic bacteria are temperature sensitive. This finding echoes the behavior of psychrophilic enzymes, manifesting a large temperature gap between optimal activity and unfolding. Protein diffusion is optimized to maintain functional fluidity at the organism's working conditions, but its temperature dependence is controlled by the proteome folded state. Our findings redefine the relationship between cytoplasmic dynamics, proteome stability, and bacterial survival in cold environments.

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Publication Details

Journal
Nature Communications
Published
2025-11-24
DOI
https://doi.org/10.1038/s41467-025-65270-5
Citations
2
Primary Topic
Bacterial Genetics and Biotechnology
Type
article
Field-Weighted Citation Impact
3.63

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article

Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles

Judith Peters, Marianne Guiral, Štěpán Timr, Tilo Seydel et al.
2 citations
Nature Communications
Bacterial Genetics and Biotechnology
3.63
article

Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles

Judith Peters, Marianne Guiral, Štěpán Timr, Tilo Seydel, Alessandro Paciaroni, Fabio Sterpone, Beatrice Caviglia, Christian Beck, Marie-Thérèse Giudici-Orticoni
article en
2 citations

Abstract

Protein diffusion, critical for cellular metabolism, occurs in the highly crowded cytoplasm. Understanding how this dynamics changes when organisms are adapted to different thermal niches is a fundamental challenge in microbiology and biophysics. In Escherichia coli, protein diffusion undergoes a pronounced slowdown at temperatures near cellular death, coinciding with the early stages of unfolding. To determine whether this phenomenon is universal, we investigated psychrophilic and hyperthermophilic bacteria. In both species, a marked diffusion slowdown takes place at the onset of proteome melting. However, while the dynamic arrest is associated with the thermal death point for the hyperthermophilic proteome, the psychrophilic proteome maintains substantial mobility well beyond the cellular inactivation. The decoupling between metabolic viability and proteome dynamics and stability suggests that the functional processes of psychrophilic bacteria are temperature sensitive. This finding echoes the behavior of psychrophilic enzymes, manifesting a large temperature gap between optimal activity and unfolding. Protein diffusion is optimized to maintain functional fluidity at the organism's working conditions, but its temperature dependence is controlled by the proteome folded state. Our findings redefine the relationship between cytoplasmic dynamics, proteome stability, and bacterial survival in cold environments.

Nature CommunicationsVol. 16(1)
Centre National de la Recherche Scientifique (FR), Institut Universitaire de France (FR), Université Paris Cité (FR), Aix-Marseille Université (FR), University of Perugia (IT), Sorbonne Université (FR), Bioénergétique et Ingénierie des Protéines (FR), Laboratoire de Biochimie Théorique (FR), Laboratoire Interdisciplinaire de Physique (FR), Institut Laue-Langevin (FR), Czech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry (CZ), University of Tübingen (DE), Université Grenoble Alpes (FR)
European Commission, Agence Nationale de la Recherche, Akademie Věd České Republiky, Centre National de la Recherche Scientifique, Grand Équipement National De Calcul Intensif
Openalex Percentile: Top 6%
Bacterial Genetics and Biotechnology
3.63
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