Cytoplasmic fluidity and the cold life: proteome stability is decoupled from viability in psychrophiles
Protein diffusion, critical for cellular metabolism, occurs in the highly crowded cytoplasm. Understanding how this dynamics changes when organisms are adapted to different thermal niches is a fundamental challenge in microbiology and biophysics. In Escherichia coli, protein diffusion undergoes a pronounced slowdown at temperatures near cellular death, coinciding with the early stages of unfolding. To determine whether this phenomenon is universal, we investigated psychrophilic and hyperthermophilic bacteria. In both species, a marked diffusion slowdown takes place at the onset of proteome melting. However, while the dynamic arrest is associated with the thermal death point for the hyperthermophilic proteome, the psychrophilic proteome maintains substantial mobility well beyond the cellular inactivation. The decoupling between metabolic viability and proteome dynamics and stability suggests that the functional processes of psychrophilic bacteria are temperature sensitive. This finding echoes the behavior of psychrophilic enzymes, manifesting a large temperature gap between optimal activity and unfolding. Protein diffusion is optimized to maintain functional fluidity at the organism's working conditions, but its temperature dependence is controlled by the proteome folded state. Our findings redefine the relationship between cytoplasmic dynamics, proteome stability, and bacterial survival in cold environments.
Authors
- Judith Peters (ORCID: https://orcid.org/0000-0001-5151-7710)
- Marianne Guiral (ORCID: https://orcid.org/0000-0002-6029-0914)
- Štěpán Timr (ORCID: https://orcid.org/0000-0002-5824-4476)
- Tilo Seydel (ORCID: https://orcid.org/0000-0001-9630-1630)
- Alessandro Paciaroni (ORCID: https://orcid.org/0000-0002-3952-1634)
- Fabio Sterpone (ORCID: https://orcid.org/0000-0003-0894-8069)
- Beatrice Caviglia (ORCID: https://orcid.org/0009-0001-2852-6931)
- Christian Beck (ORCID: https://orcid.org/0000-0001-7214-3447)
- Marie-Thérèse Giudici-Orticoni
Institutions
- Centre National de la Recherche Scientifique (FR)
- Institut Universitaire de France (FR)
- Université Paris Cité (FR)
- Aix-Marseille Université (FR)
- University of Perugia (IT)
- Sorbonne Université (FR)
- Bioénergétique et Ingénierie des Protéines (FR)
- Laboratoire de Biochimie Théorique (FR)
- Laboratoire Interdisciplinaire de Physique (FR)
- Institut Laue-Langevin (FR)
- Czech Academy of Sciences, J. Heyrovský Institute of Physical Chemistry (CZ)
- University of Tübingen (DE)
- Université Grenoble Alpes (FR)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-11-24
- DOI
- https://doi.org/10.1038/s41467-025-65270-5
- Citations
- 2
- Primary Topic
- Bacterial Genetics and Biotechnology
- Type
- article
- Field-Weighted Citation Impact
- 3.63
Funders
- European Commission
- Agence Nationale de la Recherche
- Akademie Věd České Republiky
- Centre National de la Recherche Scientifique
- Grand Équipement National De Calcul Intensif