Youngimonas ophiurae sp. nov., a Quorum-Quenching Marine Bacterium Isolated from a Brittle Star in the South China Sea, and Reclassification of Lutimaribacter litoralis as Youngimonas litoralis comb. nov.

Two novel bacterial strains, designated S70<sup>T</sup> and S69A, were isolated from a marine brittle star collected in the South China Sea. These strains are Gram-stain-negative, non-motile, aerobic, and rod-shaped. A phylogenomic analysis indicated that strains S70<sup>T</sup> and S69A formed a distinct branch with <i>Youngimonas vesicularis</i> CC-AMW-E<sup>T</sup> and <i>Lutimaribacter litoralis</i> JCM 17792<sup>T</sup>. The DNA G+C content of both strains was 61.5%. The digital DNA-DNA hybridization values with the closest relatives were 21.8, and 21.2%, respectively. Furthermore, the average nucleotide identity (ANIb) values between strain S70<sup>T</sup> and these two reference strains were 74.9% and 74.6%, respectively, both well below the 95-96% threshold for dividing prokaryotic species. The major fatty acids of strain S70<sup>T</sup> were summed feature 8 (C<sub>18:1</sub><i>ω</i>6<i>c</i> and/or C<sub>18:1</sub><i>ω</i>7<i>c</i>). Functional genomic analysis revealed that strain S70<sup>T</sup> possesses potential for hydrocarbon degradation and may play a significant role in sulfur metabolism. Additionally, strain S70<sup>T</sup> exhibited broad-spectrum AHL-degrading activity and, most notably, significantly inhibited soft rot caused by <i>Pectobacterium carotovorum</i> in potato tuber assays. Genomic comparisons further support the reclassification of <i>Lutimaribacter litoralis</i> into the genus <i>Youngimonas</i>.

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Journal
Microorganisms
Published
2025-11-22
DOI
https://doi.org/10.3390/microorganisms13122661
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

Youngimonas ophiurae sp. nov., a Quorum-Quenching Marine Bacterium Isolated from a Brittle Star in the South China Sea, and Reclassification of Lutimaribacter litoralis as Youngimonas litoralis comb. nov.

Ying Xu, Zengzhi Liu, Meng Zhang, Qiliang Lai et al.
Microorganisms
Genomics and Phylogenetic Studies
article

Youngimonas ophiurae sp. nov., a Quorum-Quenching Marine Bacterium Isolated from a Brittle Star in the South China Sea, and Reclassification of Lutimaribacter litoralis as Youngimonas litoralis comb. nov.

Ying Xu, Zengzhi Liu, Meng Zhang, Qiliang Lai, Shanshan Xu
article en

Abstract

Two novel bacterial strains, designated S70<sup>T</sup> and S69A, were isolated from a marine brittle star collected in the South China Sea. These strains are Gram-stain-negative, non-motile, aerobic, and rod-shaped. A phylogenomic analysis indicated that strains S70<sup>T</sup> and S69A formed a distinct branch with <i>Youngimonas vesicularis</i> CC-AMW-E<sup>T</sup> and <i>Lutimaribacter litoralis</i> JCM 17792<sup>T</sup>. The DNA G+C content of both strains was 61.5%. The digital DNA-DNA hybridization values with the closest relatives were 21.8, and 21.2%, respectively. Furthermore, the average nucleotide identity (ANIb) values between strain S70<sup>T</sup> and these two reference strains were 74.9% and 74.6%, respectively, both well below the 95-96% threshold for dividing prokaryotic species. The major fatty acids of strain S70<sup>T</sup> were summed feature 8 (C<sub>18:1</sub><i>ω</i>6<i>c</i> and/or C<sub>18:1</sub><i>ω</i>7<i>c</i>). Functional genomic analysis revealed that strain S70<sup>T</sup> possesses potential for hydrocarbon degradation and may play a significant role in sulfur metabolism. Additionally, strain S70<sup>T</sup> exhibited broad-spectrum AHL-degrading activity and, most notably, significantly inhibited soft rot caused by <i>Pectobacterium carotovorum</i> in potato tuber assays. Genomic comparisons further support the reclassification of <i>Lutimaribacter litoralis</i> into the genus <i>Youngimonas</i>.

MicroorganismsVol. 13(12)
Shenzhen University (CN), Ministry of Natural Resources (CN), Fujian Institute of Oceanography (CN)
Department of Education of Guangdong Province
Openalex Percentile: Top 68%
Genomics and Phylogenetic Studies
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