Quantifying tree species effects on soil organic carbon using machine learning algorithm: A case study in tropical agroforestry system of gayo coffee, Indonesia
Gayo coffee based on tropical agroforestry systems in Aceh plays an ecological role in mitigating climate change and a socio-economic role as a social livelihood in Indonesia. Ecologically, coffee agroforestry systems can increase soil carbon stocks through complex vegetation that produces litter as a source of nutrients. However, studies on measuring the contribution of vegetation to soil carbon dynamics in agroforestry lands using advanced machine learning-based statistical models in Indonesia are still very rare. Therefore, this study involved 18 complex vegetation variables to prove their contribution to soil organic carbon (SOC) dynamics using machine learning-based predictions with the random forest (RF) algorithm and hyperparameter tuning settings. The SOC available in the study area reached 173.46 ± 60.34 Mg ha -1 , with 9.20% ± 3.87% organic C, in agroforestry systems characterized by vegetation density of 1752.94 ± 459.20 trees ha -1 (range: 850-2850 trees ha -1 ), and consisted of 11 overstory species. Based on two RF model tests (rf and ranger model), SOC dynamics were influenced by vegetation by 95% (R-squared) with an error rate of 0.05 (RMSE) and 0.04 (MAE). The contribution of vegetation focuses on the variable of agroforestry richness as the most important factor in predicting SOC, even though the species Leucaena leucocephala dominates around 88% of the species composition. These results recommend that increasing agroforestry species diversity is key to increasing SOC in coffee agroforestry. This information is expected to strengthen the implementation of SFA policies and enhance the sustainability of climate change mitigation-based social livelihoods in tropical Indonesia.
Authors
- Yudi Setiawan (ORCID: https://orcid.org/0000-0002-1482-1905)
- Muhammad Reza Aulia (ORCID: https://orcid.org/0000-0002-2355-4992)
- Moh Zulfajrin (ORCID: https://orcid.org/0000-0001-8231-3622)
- Heru Bagus Pulunggono (ORCID: https://orcid.org/0000-0003-3924-7839)
- Dahlan Dahlan
- Devi Maulida Rahmah (ORCID: https://orcid.org/0000-0003-0085-0382)
- Adi Sutrisno (ORCID: https://orcid.org/0000-0002-9419-6643)
- Dedi Saputra (ORCID: https://orcid.org/0000-0002-7888-7049)
- Rika Ratna Sari (ORCID: https://orcid.org/0000-0002-3803-9352)
- Elida Novita (ORCID: https://orcid.org/0000-0001-5210-4694)
- Rahmat Pramulya (ORCID: https://orcid.org/0000-0001-8569-7203)
- Rahmat Asy’Ari
- Fitria Yuliasmara
- Tarmizi Tarmizi
- Abd Malik A Madinu (ORCID: https://orcid.org/0009-0006-7448-5030)
- Fakhruddin Fakhruddin (ORCID: https://orcid.org/0000-0002-2115-8072)
- Fachruddin Fachruddin (ORCID: https://orcid.org/0000-0003-3258-2060)
- Azelia Dwi Rahmawati
- Nihawa Hajar Pudjawati
Institutions
- University of Brawijaya (ID)
- Universitas Syiah Kuala (ID)
- IPB University (ID)
- Universitas Jember (ID)
- Universitas Borneo Tarakan (ID)
- Universitas Muhammadiyah Aceh (ID)
- Universitas Teuku Umar (ID)
- Indonesian Coffee and Cocoa Research Institute (ID)
- Center for Indonesian Veterinary Analytical Studies (ID)
- Padjadjaran University (ID)
Publication Details
- Journal
- Trees Forests and People
- Published
- 2025-11-23
- DOI
- https://doi.org/10.1016/j.tfp.2025.101098
- Primary Topic
- Cocoa and Sweet Potato Agronomy
- Type
- article
- Field-Weighted Citation Impact
- 0.00